Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 NDUFB4P4-201ENST00000404822 243 ntBASIC6.72□□□□□ -1.33
TOP2AP11388 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC6.72□□□□□ -1.33
TOP2AP11388 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.72□□□□□ -1.33
TOP2AP11388 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC6.72□□□□□ -1.33
TOP2AP11388 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC6.72□□□□□ -1.33
TOP2AP11388 AC016839.1-201ENST00000578162 867 ntBASIC6.72□□□□□ -1.33
TOP2AP11388 MIR5195-201ENST00000583555 115 ntBASIC6.72□□□□□ -1.33
TOP2AP11388 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.72□□□□□ -1.33
TOP2AP11388 AC083899.2-201ENST00000423285 1376 ntBASIC6.72□□□□□ -1.33
TOP2AP11388 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TOP2AP11388 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC6.72□□□□□ -1.33
TOP2AP11388 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
TOP2AP11388 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.33
TOP2AP11388 RNU1-33P-201ENST00000364249 162 ntBASIC6.71□□□□□ -1.33
TOP2AP11388 RNA5SP267-201ENST00000364893 126 ntBASIC6.71□□□□□ -1.33
TOP2AP11388 OR6K3-202ENST00000368146 996 ntBASIC6.71□□□□□ -1.33
TOP2AP11388 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC6.71□□□□□ -1.33
TOP2AP11388 RPL31P61-201ENST00000496160 376 ntBASIC6.71□□□□□ -1.33
TOP2AP11388 HMGN1P11-201ENST00000508668 303 ntBASIC6.71□□□□□ -1.33
TOP2AP11388 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.71□□□□□ -1.33
TOP2AP11388 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC6.71□□□□□ -1.34
TOP2AP11388 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
TOP2AP11388 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TOP2AP11388 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
TOP2AP11388 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
TOP2AP11388 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TOP2AP11388 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.71□□□□□ -1.34
TOP2AP11388 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TOP2AP11388 AC084198.1-201ENST00000477747 402 ntBASIC6.71□□□□□ -1.34
TOP2AP11388 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC6.71□□□□□ -1.34
TOP2AP11388 AC022695.1-201ENST00000522089 237 ntBASIC6.71□□□□□ -1.34
TOP2AP11388 AC093014.1-201ENST00000548926 724 ntBASIC6.71□□□□□ -1.34
TOP2AP11388 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.71□□□□□ -1.34
TOP2AP11388 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.71□□□□□ -1.34
TOP2AP11388 AC002069.2-201ENST00000603580 883 ntBASIC6.71□□□□□ -1.34
TOP2AP11388 MIR7154-201ENST00000620673 73 ntBASIC6.71□□□□□ -1.34
TOP2AP11388 AL392088.2-201ENST00000637607 285 ntBASIC6.71□□□□□ -1.34
TOP2AP11388 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TOP2AP11388 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
TOP2AP11388 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TOP2AP11388 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC6.7□□□□□ -1.34
TOP2AP11388 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TOP2AP11388 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TOP2AP11388 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC6.7□□□□□ -1.34
TOP2AP11388 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TOP2AP11388 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
TOP2AP11388 NPM1P37-201ENST00000403105 874 ntBASIC6.7□□□□□ -1.34
TOP2AP11388 AL590609.2-201ENST00000421430 368 ntBASIC6.7□□□□□ -1.34
TOP2AP11388 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TOP2AP11388 AC092641.1-201ENST00000440229 772 ntBASIC6.7□□□□□ -1.34
TOP2AP11388 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.7□□□□□ -1.34
TOP2AP11388 AL133244.1-201ENST00000456007 258 ntBASIC6.7□□□□□ -1.34
TOP2AP11388 RNA5SP103-201ENST00000459503 118 ntBASIC6.7□□□□□ -1.34
TOP2AP11388 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.7□□□□□ -1.34
TOP2AP11388 SCARNA13-201ENST00000516672 275 ntBASIC6.7□□□□□ -1.34
TOP2AP11388 SNORA70.24-201ENST00000517233 118 ntBASIC6.7□□□□□ -1.34
TOP2AP11388 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.7□□□□□ -1.34
TOP2AP11388 RANP9-201ENST00000519957 271 ntBASIC6.7□□□□□ -1.34
TOP2AP11388 OR5B10P-201ENST00000532869 642 ntBASIC6.7□□□□□ -1.34
TOP2AP11388 AC037471.2-201ENST00000564941 598 ntBASIC6.7□□□□□ -1.34
TOP2AP11388 SNORA62.6-201ENST00000606322 83 ntBASIC6.7□□□□□ -1.34
TOP2AP11388 AC138965.3-201ENST00000623875 498 ntBASIC6.7□□□□□ -1.34
TOP2AP11388 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC6.69□□□□□ -1.34
TOP2AP11388 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.69□□□□□ -1.34
TOP2AP11388 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC6.69□□□□□ -1.34
TOP2AP11388 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TOP2AP11388 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TOP2AP11388 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
TOP2AP11388 MAPRE1P3-201ENST00000435438 796 ntBASIC6.69□□□□□ -1.34
TOP2AP11388 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC6.69□□□□□ -1.34
TOP2AP11388 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC6.69□□□□□ -1.34
TOP2AP11388 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
TOP2AP11388 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TOP2AP11388 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TOP2AP11388 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC6.69□□□□□ -1.34
TOP2AP11388 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TOP2AP11388 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
TOP2AP11388 AP001642.1-201ENST00000624727 2117 ntBASIC6.68□□□□□ -1.34
TOP2AP11388 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC6.68□□□□□ -1.34
TOP2AP11388 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
TOP2AP11388 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC6.68□□□□□ -1.34
TOP2AP11388 AC005008.1-201ENST00000456151 612 ntBASIC6.68□□□□□ -1.34
TOP2AP11388 AC006511.1-201ENST00000470614 315 ntBASIC6.68□□□□□ -1.34
TOP2AP11388 RN7SL601P-201ENST00000471221 293 ntBASIC6.68□□□□□ -1.34
TOP2AP11388 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TOP2AP11388 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.68□□□□□ -1.34
TOP2AP11388 CSNK1A1P1-202ENST00000563423 981 ntBASIC6.68□□□□□ -1.34
TOP2AP11388 AC011471.1-201ENST00000585766 187 ntBASIC6.68□□□□□ -1.34
TOP2AP11388 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.68□□□□□ -1.34
TOP2AP11388 ELOCP35-201ENST00000604289 336 ntBASIC6.68□□□□□ -1.34
TOP2AP11388 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC6.68□□□□□ -1.34
TOP2AP11388 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
TOP2AP11388 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
TOP2AP11388 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
TOP2AP11388 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
TOP2AP11388 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.68□□□□□ -1.34
TOP2AP11388 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
TOP2AP11388 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
TOP2AP11388 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
TOP2AP11388 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms