Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.83□□□□□ -1.8
UBCP0CG48 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.83□□□□□ -1.8
UBCP0CG48 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.83□□□□□ -1.8
UBCP0CG48 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.83□□□□□ -1.8
UBCP0CG48 GSTA7P-201ENST00000438425 448 ntBASIC3.83□□□□□ -1.8
UBCP0CG48 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.83□□□□□ -1.8
UBCP0CG48 MED6P1-201ENST00000439659 713 ntBASIC3.83□□□□□ -1.8
UBCP0CG48 XKRYP6-201ENST00000440468 1116 ntBASIC3.83□□□□□ -1.8
UBCP0CG48 XKRYP3-201ENST00000442113 1116 ntBASIC3.83□□□□□ -1.8
UBCP0CG48 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.83□□□□□ -1.8
UBCP0CG48 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.83□□□□□ -1.8
UBCP0CG48 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.83□□□□□ -1.8
UBCP0CG48 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.83□□□□□ -1.8
UBCP0CG48 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.83□□□□□ -1.8
UBCP0CG48 HIGD1AP8-201ENST00000453927 274 ntBASIC3.83□□□□□ -1.8
UBCP0CG48 AC079804.1-201ENST00000461922 436 ntBASIC3.83□□□□□ -1.8
UBCP0CG48 AP000926.1-201ENST00000479573 241 ntBASIC3.83□□□□□ -1.8
UBCP0CG48 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.83□□□□□ -1.8
UBCP0CG48 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.83□□□□□ -1.8
UBCP0CG48 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.83□□□□□ -1.8
UBCP0CG48 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.83□□□□□ -1.8
UBCP0CG48 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.83□□□□□ -1.8
UBCP0CG48 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
UBCP0CG48 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.83□□□□□ -1.8
UBCP0CG48 MIMT1-201ENST00000597105 1050 ntBASIC3.83□□□□□ -1.8
UBCP0CG48 AC020914.4-201ENST00000597690 277 ntBASIC3.83□□□□□ -1.8
UBCP0CG48 AC022387.2-201ENST00000604050 448 ntBASIC3.83□□□□□ -1.8
UBCP0CG48 AL133243.1-201ENST00000614487 366 ntBASIC3.83□□□□□ -1.8
UBCP0CG48 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.83□□□□□ -1.8
UBCP0CG48 AC017007.4-201ENST00000503353 1352 ntBASIC3.83□□□□□ -1.8
UBCP0CG48 LINC02471-203ENST00000641941 4752 ntBASIC3.83□□□□□ -1.8
UBCP0CG48 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
UBCP0CG48 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBCP0CG48 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
UBCP0CG48 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.82□□□□□ -1.8
UBCP0CG48 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBCP0CG48 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBCP0CG48 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.82□□□□□ -1.8
UBCP0CG48 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBCP0CG48 AC027287.1-201ENST00000553115 1453 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
UBCP0CG48 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
UBCP0CG48 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBCP0CG48 MIR3074-201ENST00000384885 81 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 AL109941.1-201ENST00000401925 229 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 DHFRP5-201ENST00000406944 564 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.82□□□□□ -1.8
UBCP0CG48 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 AP001324.1-201ENST00000428553 399 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 RPEP2-201ENST00000432149 701 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.82□□□□□ -1.8
UBCP0CG48 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.82□□□□□ -1.8
UBCP0CG48 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.82□□□□□ -1.8
UBCP0CG48 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.82□□□□□ -1.8
UBCP0CG48 RPS3AP41-201ENST00000462701 778 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.82□□□□□ -1.8
UBCP0CG48 AC004453.1-201ENST00000487895 408 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.82□□□□□ -1.8
UBCP0CG48 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.82□□□□□ -1.8
UBCP0CG48 AC010285.3-201ENST00000511668 676 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.82□□□□□ -1.8
UBCP0CG48 AP001922.4-201ENST00000526967 290 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 OR4A2P-201ENST00000527276 913 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 OR5M2P-201ENST00000529003 936 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 AC007424.1-203ENST00000554613 687 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.82□□□□□ -1.8
UBCP0CG48 AC021483.2-201ENST00000567415 758 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 MIR3934-201ENST00000579806 107 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.82□□□□□ -1.8
UBCP0CG48 AP003117.1-201ENST00000602771 554 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 AC010680.4-201ENST00000605334 543 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 AL512624.1-201ENST00000613638 469 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 AC016769.4-201ENST00000616893 535 ntBASIC3.82□□□□□ -1.8
UBCP0CG48 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBCP0CG48 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
UBCP0CG48 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBCP0CG48 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
UBCP0CG48 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
UBCP0CG48 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBCP0CG48 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.81□□□□□ -1.8
UBCP0CG48 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.81□□□□□ -1.8
UBCP0CG48 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBCP0CG48 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.81□□□□□ -1.8
UBCP0CG48 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.81□□□□□ -1.8
UBCP0CG48 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBCP0CG48 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBCP0CG48 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBCP0CG48 AL627171.1-201ENST00000618845 1308 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
UBCP0CG48 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
UBCP0CG48 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
UBCP0CG48 RNU4-31P-201ENST00000384211 141 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 MIR3065-201ENST00000390137 79 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 AL645927.1-201ENST00000396783 406 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 GLULP6-201ENST00000399502 913 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 SPTLC1P2-201ENST00000407089 121 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 EIF1P3-201ENST00000423841 334 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 AL355994.1-201ENST00000424379 260 ntBASIC3.81□□□□□ -1.8
UBCP0CG48 AC234779.1-201ENST00000425910 285 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms