Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.39□□□□□ -1.55
CNOT4O95628 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 AL512286.1-201ENST00000439244 400 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.39□□□□□ -1.55
CNOT4O95628 UBE2V1P3-201ENST00000439651 417 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.39□□□□□ -1.55
CNOT4O95628 FTLP8-201ENST00000446770 267 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.39□□□□□ -1.55
CNOT4O95628 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.39□□□□□ -1.55
CNOT4O95628 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.39□□□□□ -1.55
CNOT4O95628 RPS27AP3-201ENST00000453803 454 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.39□□□□□ -1.55
CNOT4O95628 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.39□□□□□ -1.55
CNOT4O95628 AMD1P1-201ENST00000457220 922 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 RPL5P22-201ENST00000480199 884 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 RPL9P6-201ENST00000492764 598 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.39□□□□□ -1.55
CNOT4O95628 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.39□□□□□ -1.55
CNOT4O95628 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.39□□□□□ -1.55
CNOT4O95628 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.39□□□□□ -1.55
CNOT4O95628 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CNOT4O95628 HMGB1P44-201ENST00000508597 572 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.39□□□□□ -1.55
CNOT4O95628 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.39□□□□□ -1.55
CNOT4O95628 SCARNA18.1-201ENST00000516330 83 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.39□□□□□ -1.55
CNOT4O95628 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.39□□□□□ -1.55
CNOT4O95628 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.39□□□□□ -1.55
CNOT4O95628 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.39□□□□□ -1.55
CNOT4O95628 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC5.39□□□□□ -1.55
CNOT4O95628 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.39□□□□□ -1.55
CNOT4O95628 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.39□□□□□ -1.55
CNOT4O95628 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.39□□□□□ -1.55
CNOT4O95628 FGF7P1-201ENST00000582820 288 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 AC110743.1-201ENST00000584870 478 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.39□□□□□ -1.55
CNOT4O95628 AC068768.2-201ENST00000602352 343 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 AC027243.2-201ENST00000602530 724 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 AP000860.1-201ENST00000605250 559 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNOT4O95628 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CNOT4O95628 AC006338.1-201ENST00000618453 749 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.39□□□□□ -1.55
CNOT4O95628 AC127024.6-201ENST00000621598 424 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 AC004009.2-201ENST00000623016 728 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.39□□□□□ -1.55
CNOT4O95628 CDRT1-208ENST00000630868 794 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 AC073488.3-201ENST00000631611 778 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNOT4O95628 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNOT4O95628 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CNOT4O95628 RBMY1HP-201ENST00000382759 1389 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNOT4O95628 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
CNOT4O95628 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.39□□□□□ -1.55
CNOT4O95628 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CNOT4O95628 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CNOT4O95628 Z99496.1-201ENST00000469424 1477 ntBASIC5.39□□□□□ -1.55
CNOT4O95628 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CNOT4O95628 ASNSP1-201ENST00000518311 1939 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CNOT4O95628 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.38□□□□□ -1.55
CNOT4O95628 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.38□□□□□ -1.55
CNOT4O95628 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CNOT4O95628 AC109446.4-201ENST00000623235 2755 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNOT4O95628 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CNOT4O95628 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CNOT4O95628 RNA5SP110-201ENST00000362638 115 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 Y_RNA.61-201ENST00000362835 102 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 RN7SKP226-201ENST00000364912 300 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.38□□□□□ -1.55
CNOT4O95628 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CNOT4O95628 RNU6-1011P-201ENST00000384668 107 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 MIR1277-201ENST00000408536 78 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 MTATP6P27-201ENST00000416987 621 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 AC245054.1-201ENST00000420944 258 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 MTCO3P1-205ENST00000422088 832 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.38□□□□□ -1.55
CNOT4O95628 RPL31P54-201ENST00000429803 370 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.38□□□□□ -1.55
CNOT4O95628 AC023141.3-201ENST00000436698 278 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 TUBB4BP6-201ENST00000437576 479 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 H3F3BP1-201ENST00000440551 403 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 AL512593.1-201ENST00000444758 779 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.38□□□□□ -1.55
CNOT4O95628 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.38□□□□□ -1.55
CNOT4O95628 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.38□□□□□ -1.55
CNOT4O95628 AC005077.1-201ENST00000449226 375 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.38□□□□□ -1.55
CNOT4O95628 AC007998.1-201ENST00000474156 672 ntBASIC5.38□□□□□ -1.55
CNOT4O95628 AC073522.1-201ENST00000483312 377 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms