Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 AC012414.2-201ENST00000559474 187 ntBASIC4.72□□□□□ -1.65
UBE4BO95155 AL049844.2-201ENST00000604280 628 ntBASIC4.72□□□□□ -1.65
UBE4BO95155 AL031666.3-201ENST00000609320 1006 ntBASIC4.72□□□□□ -1.65
UBE4BO95155 FAM27D1-201ENST00000612308 341 ntBASIC4.72□□□□□ -1.65
UBE4BO95155 AC116447.1-201ENST00000613153 453 ntBASIC4.72□□□□□ -1.65
UBE4BO95155 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.72□□□□□ -1.65
UBE4BO95155 AC079298.2-201ENST00000623885 459 ntBASIC4.72□□□□□ -1.65
UBE4BO95155 AC017002.4-201ENST00000604721 1525 ntBASIC4.71□□□□□ -1.65
UBE4BO95155 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
UBE4BO95155 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
UBE4BO95155 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBE4BO95155 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.71□□□□□ -1.66
UBE4BO95155 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBE4BO95155 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBE4BO95155 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBE4BO95155 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBE4BO95155 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
UBE4BO95155 RNU6-244P-201ENST00000391028 104 ntBASIC4.71□□□□□ -1.66
UBE4BO95155 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.71□□□□□ -1.66
UBE4BO95155 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.71□□□□□ -1.66
UBE4BO95155 GTF2IP2-201ENST00000424290 697 ntBASIC4.71□□□□□ -1.66
UBE4BO95155 DPY19L1P2-201ENST00000426647 915 ntBASIC4.71□□□□□ -1.66
UBE4BO95155 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.71□□□□□ -1.66
UBE4BO95155 RPS29P17-201ENST00000430795 166 ntBASIC4.71□□□□□ -1.66
UBE4BO95155 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UBE4BO95155 AC092013.1-201ENST00000438795 332 ntBASIC4.71□□□□□ -1.66
UBE4BO95155 MTND6P18-201ENST00000439477 513 ntBASIC4.71□□□□□ -1.66
UBE4BO95155 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.71□□□□□ -1.66
UBE4BO95155 PTMAP3-201ENST00000447474 330 ntBASIC4.71□□□□□ -1.66
UBE4BO95155 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.71□□□□□ -1.66
UBE4BO95155 MTND3P4-201ENST00000453537 303 ntBASIC4.71□□□□□ -1.66
UBE4BO95155 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.71□□□□□ -1.66
UBE4BO95155 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.71□□□□□ -1.66
UBE4BO95155 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.71□□□□□ -1.66
UBE4BO95155 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.71□□□□□ -1.66
UBE4BO95155 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
UBE4BO95155 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.71□□□□□ -1.66
UBE4BO95155 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.71□□□□□ -1.66
UBE4BO95155 BNIP3P22-201ENST00000593399 556 ntBASIC4.71□□□□□ -1.66
UBE4BO95155 PSMA6P4-201ENST00000603247 718 ntBASIC4.71□□□□□ -1.66
UBE4BO95155 AC090953.1-201ENST00000604305 1092 ntBASIC4.71□□□□□ -1.66
UBE4BO95155 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.71□□□□□ -1.66
UBE4BO95155 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.71□□□□□ -1.66
UBE4BO95155 AC009237.17-201ENST00000618111 748 ntBASIC4.71□□□□□ -1.66
UBE4BO95155 AL445363.3-201ENST00000623080 671 ntBASIC4.71□□□□□ -1.66
UBE4BO95155 AC008013.2-202ENST00000637965 364 ntBASIC4.71□□□□□ -1.66
UBE4BO95155 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
UBE4BO95155 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UBE4BO95155 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
UBE4BO95155 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
UBE4BO95155 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
UBE4BO95155 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
UBE4BO95155 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
UBE4BO95155 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
UBE4BO95155 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
UBE4BO95155 RNU1-14P-201ENST00000362759 152 ntBASIC4.7□□□□□ -1.66
UBE4BO95155 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.7□□□□□ -1.66
UBE4BO95155 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.7□□□□□ -1.66
UBE4BO95155 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.7□□□□□ -1.66
UBE4BO95155 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.7□□□□□ -1.66
UBE4BO95155 AL590623.1-201ENST00000427864 105 ntBASIC4.7□□□□□ -1.66
UBE4BO95155 RPS3AP54-201ENST00000435535 734 ntBASIC4.7□□□□□ -1.66
UBE4BO95155 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.7□□□□□ -1.66
UBE4BO95155 CBX1P1-201ENST00000440184 427 ntBASIC4.7□□□□□ -1.66
UBE4BO95155 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.7□□□□□ -1.66
UBE4BO95155 EIF4A1P11-201ENST00000451239 222 ntBASIC4.7□□□□□ -1.66
UBE4BO95155 RPS6P2-201ENST00000454208 705 ntBASIC4.7□□□□□ -1.66
UBE4BO95155 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.7□□□□□ -1.66
UBE4BO95155 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.7□□□□□ -1.66
UBE4BO95155 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.7□□□□□ -1.66
UBE4BO95155 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.7□□□□□ -1.66
UBE4BO95155 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.7□□□□□ -1.66
UBE4BO95155 NPM1P47-201ENST00000560843 856 ntBASIC4.7□□□□□ -1.66
UBE4BO95155 RN7SL176P-201ENST00000580352 264 ntBASIC4.7□□□□□ -1.66
UBE4BO95155 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.7□□□□□ -1.66
UBE4BO95155 AC020658.4-201ENST00000613987 684 ntBASIC4.7□□□□□ -1.66
UBE4BO95155 uc_338.9-201ENST00000617424 182 ntBASIC4.7□□□□□ -1.66
UBE4BO95155 AC015908.5-201ENST00000623289 343 ntBASIC4.7□□□□□ -1.66
UBE4BO95155 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.7□□□□□ -1.66
UBE4BO95155 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
UBE4BO95155 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UBE4BO95155 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
UBE4BO95155 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
UBE4BO95155 AC010329.2-201ENST00000595195 2737 ntBASIC4.69□□□□□ -1.66
UBE4BO95155 AC009229.4-201ENST00000623854 1947 ntBASIC4.69□□□□□ -1.66
UBE4BO95155 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
UBE4BO95155 AC104118.1-201ENST00000607625 1589 ntBASIC4.69□□□□□ -1.66
UBE4BO95155 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.69□□□□□ -1.66
UBE4BO95155 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
UBE4BO95155 IGKV7-3-201ENST00000357453 298 ntBASIC4.69□□□□□ -1.66
UBE4BO95155 RNU1-94P-201ENST00000362627 173 ntBASIC4.69□□□□□ -1.66
UBE4BO95155 Y_RNA.126-201ENST00000363382 111 ntBASIC4.69□□□□□ -1.66
UBE4BO95155 RNA5SP509-201ENST00000364577 119 ntBASIC4.69□□□□□ -1.66
UBE4BO95155 AL049693.1-201ENST00000402760 611 ntBASIC4.69□□□□□ -1.66
UBE4BO95155 GSTM3P2-201ENST00000412746 530 ntBASIC4.69□□□□□ -1.66
UBE4BO95155 MFSD13B-201ENST00000420133 1290 ntBASIC4.69□□□□□ -1.66
UBE4BO95155 AL353597.2-202ENST00000434901 373 ntBASIC4.69□□□□□ -1.66
UBE4BO95155 MTND2P21-201ENST00000436242 1042 ntBASIC4.69□□□□□ -1.66
UBE4BO95155 ACTR3P2-201ENST00000439585 1257 ntBASIC4.69□□□□□ -1.66
UBE4BO95155 RAD23BP3-201ENST00000454157 1152 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms