Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 RPL34P6-201ENST00000432390 345 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 AC091390.1-201ENST00000433904 331 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 AC073143.1-201ENST00000436316 395 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 THAP5P1-201ENST00000439089 262 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.28□□□□□ -1.72
LMX1BO60663 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.28□□□□□ -1.72
LMX1BO60663 KATNBL1P3-201ENST00000443475 909 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.28□□□□□ -1.72
LMX1BO60663 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.28□□□□□ -1.72
LMX1BO60663 AC244505.3-201ENST00000454598 187 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.28□□□□□ -1.72
LMX1BO60663 NDUFA12P1-201ENST00000455914 406 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.28□□□□□ -1.72
LMX1BO60663 USP9YP25-201ENST00000457708 443 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.28□□□□□ -1.72
LMX1BO60663 RPS20P4-201ENST00000461659 355 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LMX1BO60663 AC107398.1-201ENST00000486904 505 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.28□□□□□ -1.72
LMX1BO60663 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.28□□□□□ -1.72
LMX1BO60663 AC118282.2-201ENST00000508739 374 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 MTND1P22-201ENST00000510572 951 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.28□□□□□ -1.72
LMX1BO60663 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.28□□□□□ -1.72
LMX1BO60663 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.28□□□□□ -1.72
LMX1BO60663 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.28□□□□□ -1.72
LMX1BO60663 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.28□□□□□ -1.72
LMX1BO60663 AC087477.6-201ENST00000559595 843 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.28□□□□□ -1.72
LMX1BO60663 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.28□□□□□ -1.72
LMX1BO60663 MIR4691-201ENST00000583764 85 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 AC015688.2-201ENST00000584523 262 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.28□□□□□ -1.72
LMX1BO60663 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.28□□□□□ -1.72
LMX1BO60663 AL109653.1-201ENST00000603091 248 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 AP002906.1-201ENST00000603405 233 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 Z99497.2-201ENST00000603634 310 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 AC005377.1-201ENST00000605126 456 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 AC096586.1-201ENST00000610267 561 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.28□□□□□ -1.72
LMX1BO60663 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LMX1BO60663 AC007996.1-201ENST00000620414 2821 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.28□□□□□ -1.72
LMX1BO60663 AC007342.7-201ENST00000624610 2337 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 SDAD1P1-202ENST00000524156 2051 ntBASIC4.28□□□□□ -1.72
LMX1BO60663 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
LMX1BO60663 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
LMX1BO60663 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.27□□□□□ -1.73
LMX1BO60663 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMX1BO60663 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMX1BO60663 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMX1BO60663 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMX1BO60663 RNVU1-6-201ENST00000364688 164 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMX1BO60663 SNORD65C-201ENST00000390962 71 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 MTCO1P56-201ENST00000401674 224 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 AL357515.1-201ENST00000402967 542 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 RPS16P5-201ENST00000406501 404 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.27□□□□□ -1.73
LMX1BO60663 HSFY4P-201ENST00000415994 1181 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.27□□□□□ -1.73
LMX1BO60663 EIF4HP2-201ENST00000424380 563 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 C1DP1-201ENST00000426049 402 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 DNAJC19P7-201ENST00000428811 344 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.27□□□□□ -1.73
LMX1BO60663 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.27□□□□□ -1.73
LMX1BO60663 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.27□□□□□ -1.73
LMX1BO60663 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.27□□□□□ -1.73
LMX1BO60663 AC011753.3-201ENST00000443436 406 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.27□□□□□ -1.73
LMX1BO60663 AL354714.3-201ENST00000447284 493 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 MRPL35P4-201ENST00000453682 566 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 RNA5SP103-201ENST00000459503 118 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 AC005410.1-202ENST00000460347 485 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.27□□□□□ -1.73
LMX1BO60663 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.27□□□□□ -1.73
LMX1BO60663 RN7SL459P-201ENST00000481078 302 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 AC126121.1-201ENST00000482313 553 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.27□□□□□ -1.73
LMX1BO60663 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.27□□□□□ -1.73
LMX1BO60663 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.27□□□□□ -1.73
LMX1BO60663 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.27□□□□□ -1.73
LMX1BO60663 AC104417.1-201ENST00000523974 751 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.27□□□□□ -1.73
LMX1BO60663 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.27□□□□□ -1.73
LMX1BO60663 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LMX1BO60663 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LMX1BO60663 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.27□□□□□ -1.73
LMX1BO60663 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.27□□□□□ -1.73
LMX1BO60663 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.27□□□□□ -1.73
LMX1BO60663 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.27□□□□□ -1.73
LMX1BO60663 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.27□□□□□ -1.73
LMX1BO60663 AC018552.1-201ENST00000562099 811 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.27□□□□□ -1.73
LMX1BO60663 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.27□□□□□ -1.73
LMX1BO60663 AC068790.2-201ENST00000602601 557 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 AL627230.1-201ENST00000613077 211 ntBASIC4.27□□□□□ -1.73
LMX1BO60663 AL049794.2-201ENST00000616301 365 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms