Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 XKRYP6-201ENST00000440468 1116 ntBASIC4.59□□□□□ -1.67
MSH4O15457 XKRYP3-201ENST00000442113 1116 ntBASIC4.59□□□□□ -1.67
MSH4O15457 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH4O15457 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH4O15457 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH4O15457 STRADBP1-201ENST00000478954 1281 ntBASIC4.59□□□□□ -1.67
MSH4O15457 AC006517.1-201ENST00000480485 328 ntBASIC4.59□□□□□ -1.67
MSH4O15457 RPL29P14-201ENST00000495837 428 ntBASIC4.59□□□□□ -1.67
MSH4O15457 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH4O15457 MIR2116-201ENST00000517221 80 ntBASIC4.59□□□□□ -1.67
MSH4O15457 HMGB1P19-201ENST00000517578 577 ntBASIC4.59□□□□□ -1.67
MSH4O15457 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH4O15457 AC018442.3-201ENST00000523025 183 ntBASIC4.59□□□□□ -1.67
MSH4O15457 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH4O15457 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.59□□□□□ -1.67
MSH4O15457 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.59□□□□□ -1.67
MSH4O15457 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
MSH4O15457 AC122134.1-201ENST00000565664 1104 ntBASIC4.59□□□□□ -1.67
MSH4O15457 AC079171.1-201ENST00000568788 914 ntBASIC4.59□□□□□ -1.67
MSH4O15457 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH4O15457 AC110743.1-201ENST00000584870 478 ntBASIC4.59□□□□□ -1.67
MSH4O15457 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH4O15457 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
MSH4O15457 BNIP3P7-201ENST00000605641 516 ntBASIC4.59□□□□□ -1.67
MSH4O15457 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH4O15457 MIR6868-201ENST00000611215 58 ntBASIC4.59□□□□□ -1.67
MSH4O15457 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.59□□□□□ -1.67
MSH4O15457 RMST_5.1-201ENST00000618704 126 ntBASIC4.59□□□□□ -1.67
MSH4O15457 AC093775.1-201ENST00000624154 1868 ntBASIC4.59□□□□□ -1.67
MSH4O15457 CASC19-261ENST00000641853 1638 ntBASIC4.59□□□□□ -1.67
MSH4O15457 Z82217.1-201ENST00000625157 8149 ntBASIC4.59□□□□□ -1.67
MSH4O15457 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
MSH4O15457 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
MSH4O15457 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
MSH4O15457 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
MSH4O15457 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
MSH4O15457 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
MSH4O15457 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
MSH4O15457 MARK2P15-201ENST00000432204 2186 ntBASIC4.58□□□□□ -1.68
MSH4O15457 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MSH4O15457 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
MSH4O15457 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MSH4O15457 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.58□□□□□ -1.68
MSH4O15457 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
MSH4O15457 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
MSH4O15457 SNORA60-201ENST00000362396 134 ntBASIC4.58□□□□□ -1.68
MSH4O15457 PPIAP31-201ENST00000405422 495 ntBASIC4.58□□□□□ -1.68
MSH4O15457 MIR1193-201ENST00000408109 78 ntBASIC4.58□□□□□ -1.68
MSH4O15457 RNU4-6P-201ENST00000410804 122 ntBASIC4.58□□□□□ -1.68
MSH4O15457 RNU6-564P-201ENST00000410983 104 ntBASIC4.58□□□□□ -1.68
MSH4O15457 OR5BE1P-201ENST00000425977 939 ntBASIC4.58□□□□□ -1.68
MSH4O15457 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.58□□□□□ -1.68
MSH4O15457 DYNLL1P7-201ENST00000429273 258 ntBASIC4.58□□□□□ -1.68
MSH4O15457 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MSH4O15457 AL162151.2-201ENST00000448875 158 ntBASIC4.58□□□□□ -1.68
MSH4O15457 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.58□□□□□ -1.68
MSH4O15457 RPL23AP2-201ENST00000471227 466 ntBASIC4.58□□□□□ -1.68
MSH4O15457 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MSH4O15457 FTH1P21-201ENST00000512179 511 ntBASIC4.58□□□□□ -1.68
MSH4O15457 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.58□□□□□ -1.68
MSH4O15457 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.58□□□□□ -1.68
MSH4O15457 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
MSH4O15457 OR8R1P-201ENST00000543943 764 ntBASIC4.58□□□□□ -1.68
MSH4O15457 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.58□□□□□ -1.68
MSH4O15457 AC009268.1-201ENST00000561352 1203 ntBASIC4.58□□□□□ -1.68
MSH4O15457 AC025627.2-201ENST00000576220 160 ntBASIC4.58□□□□□ -1.68
MSH4O15457 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.58□□□□□ -1.68
MSH4O15457 OR5BE1P-202ENST00000641168 1176 ntBASIC4.58□□□□□ -1.68
MSH4O15457 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MSH4O15457 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MSH4O15457 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
MSH4O15457 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MSH4O15457 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
MSH4O15457 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MSH4O15457 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
MSH4O15457 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MSH4O15457 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
MSH4O15457 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MSH4O15457 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MSH4O15457 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
MSH4O15457 RNU1-108P-201ENST00000362556 161 ntBASIC4.57□□□□□ -1.68
MSH4O15457 SNORD35B-201ENST00000363660 87 ntBASIC4.57□□□□□ -1.68
MSH4O15457 AL139039.2-201ENST00000407436 479 ntBASIC4.57□□□□□ -1.68
MSH4O15457 RN7SKP263-201ENST00000411194 309 ntBASIC4.57□□□□□ -1.68
MSH4O15457 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.57□□□□□ -1.68
MSH4O15457 MTND4LP13-201ENST00000425022 298 ntBASIC4.57□□□□□ -1.68
MSH4O15457 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.57□□□□□ -1.68
MSH4O15457 RPL21P89-201ENST00000444021 467 ntBASIC4.57□□□□□ -1.68
MSH4O15457 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.57□□□□□ -1.68
MSH4O15457 CCRL1P1-201ENST00000449542 1053 ntBASIC4.57□□□□□ -1.68
MSH4O15457 RPS11P1-201ENST00000451072 473 ntBASIC4.57□□□□□ -1.68
MSH4O15457 HSPE1P22-201ENST00000456856 327 ntBASIC4.57□□□□□ -1.68
MSH4O15457 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.57□□□□□ -1.68
MSH4O15457 AC092691.2-201ENST00000461787 803 ntBASIC4.57□□□□□ -1.68
MSH4O15457 RPL21P6-201ENST00000479171 504 ntBASIC4.57□□□□□ -1.68
MSH4O15457 AC006499.6-201ENST00000511169 607 ntBASIC4.57□□□□□ -1.68
MSH4O15457 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MSH4O15457 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.57□□□□□ -1.68
MSH4O15457 AC109635.6-201ENST00000525487 1113 ntBASIC4.57□□□□□ -1.68
MSH4O15457 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms