Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CUX2O14529 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CUX2O14529 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC7□□□□□ -1.29
CUX2O14529 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CUX2O14529 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CUX2O14529 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
CUX2O14529 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
CUX2O14529 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.99□□□□□ -1.29
CUX2O14529 ANKRD36P1-201ENST00000344424 659 ntBASIC6.99□□□□□ -1.29
CUX2O14529 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.99□□□□□ -1.29
CUX2O14529 CEACAMP1-201ENST00000434624 1035 ntBASIC6.99□□□□□ -1.29
CUX2O14529 AL031584.1-201ENST00000447169 754 ntBASIC6.99□□□□□ -1.29
CUX2O14529 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.99□□□□□ -1.29
CUX2O14529 AC118465.1-201ENST00000513820 1271 ntBASIC6.99□□□□□ -1.29
CUX2O14529 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.99□□□□□ -1.29
CUX2O14529 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.99□□□□□ -1.29
CUX2O14529 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.99□□□□□ -1.29
CUX2O14529 YPEL5P2-201ENST00000605553 359 ntBASIC6.99□□□□□ -1.29
CUX2O14529 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.99□□□□□ -1.29
CUX2O14529 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC6.99□□□□□ -1.29
CUX2O14529 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CUX2O14529 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CUX2O14529 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CUX2O14529 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CUX2O14529 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CUX2O14529 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.99□□□□□ -1.29
CUX2O14529 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.99□□□□□ -1.29
CUX2O14529 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC6.99□□□□□ -1.29
CUX2O14529 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.99□□□□□ -1.29
CUX2O14529 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
CUX2O14529 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
CUX2O14529 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.98□□□□□ -1.29
CUX2O14529 RPL21P23-201ENST00000446654 460 ntBASIC6.98□□□□□ -1.29
CUX2O14529 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC6.98□□□□□ -1.29
CUX2O14529 AC007458.1-201ENST00000542812 373 ntBASIC6.98□□□□□ -1.29
CUX2O14529 ATE1-AS1-202ENST00000636460 506 ntBASIC6.98□□□□□ -1.29
CUX2O14529 AC068870.3-201ENST00000625077 2536 ntBASIC6.98□□□□□ -1.29
CUX2O14529 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
CUX2O14529 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CUX2O14529 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
CUX2O14529 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
CUX2O14529 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC6.98□□□□□ -1.29
CUX2O14529 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
CUX2O14529 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC6.98□□□□□ -1.29
CUX2O14529 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CUX2O14529 SNORD3H-201ENST00000384486 214 ntBASIC6.98□□□□□ -1.29
CUX2O14529 AL035423.1-201ENST00000420331 213 ntBASIC6.98□□□□□ -1.29
CUX2O14529 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.98□□□□□ -1.29
CUX2O14529 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.98□□□□□ -1.29
CUX2O14529 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CUX2O14529 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC6.98□□□□□ -1.29
CUX2O14529 TPT1P1-201ENST00000458495 518 ntBASIC6.98□□□□□ -1.29
CUX2O14529 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.98□□□□□ -1.29
CUX2O14529 AC006064.5-201ENST00000541782 248 ntBASIC6.98□□□□□ -1.29
CUX2O14529 YPEL5P3-201ENST00000547227 352 ntBASIC6.98□□□□□ -1.29
CUX2O14529 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.98□□□□□ -1.29
CUX2O14529 AC006504.3-201ENST00000586818 523 ntBASIC6.98□□□□□ -1.29
CUX2O14529 AC243312.2-201ENST00000623340 601 ntBASIC6.98□□□□□ -1.29
CUX2O14529 AC110801.1-201ENST00000623590 212 ntBASIC6.98□□□□□ -1.29
CUX2O14529 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CUX2O14529 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC6.97□□□□□ -1.29
CUX2O14529 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CUX2O14529 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CUX2O14529 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CUX2O14529 RNU1-33P-201ENST00000364249 162 ntBASIC6.97□□□□□ -1.29
CUX2O14529 UBE2V1P2-201ENST00000397758 440 ntBASIC6.97□□□□□ -1.29
CUX2O14529 EIF1P3-201ENST00000423841 334 ntBASIC6.97□□□□□ -1.29
CUX2O14529 AC005326.1-201ENST00000429197 123 ntBASIC6.97□□□□□ -1.29
CUX2O14529 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.97□□□□□ -1.29
CUX2O14529 AC139783.2-201ENST00000504847 1145 ntBASIC6.97□□□□□ -1.29
CUX2O14529 SCARNA14-201ENST00000516903 136 ntBASIC6.97□□□□□ -1.29
CUX2O14529 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.97□□□□□ -1.29
CUX2O14529 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.97□□□□□ -1.29
CUX2O14529 MIR5684-201ENST00000585074 65 ntBASIC6.97□□□□□ -1.29
CUX2O14529 AC015726.1-201ENST00000602353 681 ntBASIC6.97□□□□□ -1.29
CUX2O14529 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.97□□□□□ -1.29
CUX2O14529 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CUX2O14529 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CUX2O14529 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC6.96□□□□□ -1.29
CUX2O14529 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
CUX2O14529 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
CUX2O14529 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.29
CUX2O14529 AL133268.1-201ENST00000405676 1401 ntBASIC6.96□□□□□ -1.3
CUX2O14529 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
CUX2O14529 RNA5SP120-201ENST00000410900 112 ntBASIC6.96□□□□□ -1.3
CUX2O14529 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC6.96□□□□□ -1.3
CUX2O14529 RPL7P1-201ENST00000468161 747 ntBASIC6.96□□□□□ -1.3
CUX2O14529 HMGN1P11-201ENST00000508668 303 ntBASIC6.96□□□□□ -1.3
CUX2O14529 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
CUX2O14529 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.96□□□□□ -1.3
CUX2O14529 AC234782.5-201ENST00000617723 324 ntBASIC6.96□□□□□ -1.3
CUX2O14529 AL392088.2-201ENST00000637607 285 ntBASIC6.96□□□□□ -1.3
CUX2O14529 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.95□□□□□ -1.3
CUX2O14529 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CUX2O14529 MIR1911-201ENST00000410783 80 ntBASIC6.95□□□□□ -1.3
CUX2O14529 RPS11P1-201ENST00000451072 473 ntBASIC6.95□□□□□ -1.3
CUX2O14529 RPS4XP18-201ENST00000495480 763 ntBASIC6.95□□□□□ -1.3
CUX2O14529 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CUX2O14529 HMGB2P1-201ENST00000591146 634 ntBASIC6.95□□□□□ -1.3
CUX2O14529 AC136601.2-201ENST00000604356 474 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms