Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM38O00635 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.22□□□□□ -1.57
TRIM38O00635 AC099494.2-201ENST00000623371 978 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 OR2L1P-202ENST00000641567 1023 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 AC073869.8-201ENST00000641806 335 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM38O00635 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.22□□□□□ -1.57
TRIM38O00635 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.22□□□□□ -1.57
TRIM38O00635 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
TRIM38O00635 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
TRIM38O00635 SGO1P1-201ENST00000603525 1447 ntBASIC5.22□□□□□ -1.57
TRIM38O00635 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM38O00635 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
TRIM38O00635 AC025574.1-201ENST00000554784 1653 ntBASIC5.21□□□□□ -1.57
TRIM38O00635 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
TRIM38O00635 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
TRIM38O00635 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.21□□□□□ -1.57
TRIM38O00635 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM38O00635 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM38O00635 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM38O00635 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM38O00635 Z98755.1-201ENST00000407015 1384 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 USP9YP4-201ENST00000424401 1745 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM38O00635 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM38O00635 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TRIM38O00635 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM38O00635 LRRC37BP1-201ENST00000398851 714 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 AL079342.2-201ENST00000403367 482 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM38O00635 RN7SKP182-201ENST00000410772 298 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM38O00635 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM38O00635 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM38O00635 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM38O00635 AC009518.2-201ENST00000418056 731 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 RPS3AP37-201ENST00000419176 745 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM38O00635 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM38O00635 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.21□□□□□ -1.58
TRIM38O00635 AC104634.1-201ENST00000452720 462 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 AC092647.2-201ENST00000452998 253 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM38O00635 VN1R40P-201ENST00000455196 941 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM38O00635 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM38O00635 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM38O00635 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.21□□□□□ -1.58
TRIM38O00635 AC015724.1-201ENST00000478577 156 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM38O00635 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM38O00635 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC5.21□□□□□ -1.58
TRIM38O00635 AC004980.4-201ENST00000513375 203 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM38O00635 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM38O00635 OR5AZ1P-201ENST00000527448 943 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
TRIM38O00635 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM38O00635 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM38O00635 OR4U1P-201ENST00000554958 912 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.21□□□□□ -1.58
TRIM38O00635 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM38O00635 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM38O00635 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM38O00635 BPTFP1-201ENST00000579209 492 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM38O00635 AC011447.4-201ENST00000587562 111 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM38O00635 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM38O00635 AC010620.1-201ENST00000601088 1102 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM38O00635 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.21□□□□□ -1.58
TRIM38O00635 AC099676.1-201ENST00000608886 657 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 AC011939.3-201ENST00000613686 466 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 AL392048.1-201ENST00000613946 534 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.21□□□□□ -1.58
TRIM38O00635 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM38O00635 AL731532.2-201ENST00000623542 1953 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.21□□□□□ -1.58
TRIM38O00635 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TRIM38O00635 AC004817.4-201ENST00000602396 3625 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
TRIM38O00635 AL353743.4-201ENST00000422653 1547 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM38O00635 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM38O00635 SAMMSON-213ENST00000641336 1521 ntBASIC5.21□□□□□ -1.58
TRIM38O00635 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
TRIM38O00635 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM38O00635 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TRIM38O00635 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM38O00635 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM38O00635 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TRIM38O00635 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM38O00635 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.2□□□□□ -1.58
TRIM38O00635 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM38O00635 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM38O00635 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
TRIM38O00635 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TRIM38O00635 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms