Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 MTND4P31-201ENST00000425607 1343 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 RNA5SP435-201ENST00000364044 108 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 MIR765-201ENST00000390226 114 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 CHEK2P3-201ENST00000416118 248 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC234064.1-201ENST00000436312 247 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 PTENP1-201ENST00000447117 1215 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC234781.3-201ENST00000452540 973 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 snoU13.20-201ENST00000459180 104 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AL161747.1-201ENST00000480068 358 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC073522.1-201ENST00000483312 377 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AL035404.1-201ENST00000497982 568 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 BTF3P13-201ENST00000513224 490 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC018442.3-201ENST00000523025 183 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 LDHC-203ENST00000535809 757 ntTSL 5 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC133555.2-201ENST00000550213 292 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 MIR4675-201ENST00000577898 77 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 SUMO2P15-201ENST00000604285 278 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC021749.1-201ENST00000604322 607 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AP001521.2-201ENST00000608772 546 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AL592148.2-201ENST00000612210 372 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AL512624.1-201ENST00000613638 469 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 uc_338.9-201ENST00000617424 182 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC139769.3-201ENST00000618383 175 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 MIR6886-201ENST00000619864 61 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 RNF6P1-201ENST00000444889 1784 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 MTCO1P11-201ENST00000429111 1528 ntBASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TCRBV7S3A2A0A539 AC006042.3-201ENST00000454684 1469 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 C4BPAP1-201ENST00000415474 1893 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AL590290.1-201ENST00000405336 380 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AC093162.1-201ENST00000419682 124 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 OR2AM1P-201ENST00000422137 422 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 NPM1P22-201ENST00000427761 952 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 MTND5P25-201ENST00000430499 799 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 PRPF38AP2-201ENST00000438179 851 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AC112498.1-201ENST00000444401 332 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AC104651.2-201ENST00000447549 528 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 USP9YP25-201ENST00000457708 443 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 RNA5SP34-201ENST00000516887 130 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 IGJP1-201ENST00000522682 475 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 OR4A2P-201ENST00000527276 913 ntBASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.81□□□□□ -1.64
TCRBV7S3A2A0A539 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms