Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 MIR133B-201ENST00000362210 119 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 SNORD96B-201ENST00000386148 79 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 MIR550A3-201ENST00000390735 95 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 GSTA12P-201ENST00000402398 508 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 RN7SKP213-201ENST00000410746 298 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AC008173.1-201ENST00000418901 264 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 SLC35E1P1-201ENST00000419313 864 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 RPA2P2-201ENST00000419698 796 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 GLUD1P9-201ENST00000420997 1173 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AL590762.4-201ENST00000425885 253 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AC092017.2-201ENST00000427600 362 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 Z95152.1-201ENST00000453556 656 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 RANP1-206ENST00000455094 651 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 RPL35AP28-201ENST00000459730 331 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 SYT14P1-201ENST00000481459 721 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 BET1P1-201ENST00000482276 359 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 RPL21P131-201ENST00000497298 483 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 RNU6-1028P-201ENST00000517164 93 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AC022882.1-201ENST00000532142 501 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AC061975.8-201ENST00000587058 721 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AC012254.4-201ENST00000588843 273 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 MTND3P19-201ENST00000603825 345 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AP005432.2-201ENST00000608162 586 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AC000068.2-201ENST00000608816 460 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 MIR6820-201ENST00000611508 62 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AC131238.1-201ENST00000617135 328 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 AC005086.4-201ENST00000623065 213 ntBASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDHGB1Q9Y5G3 PANDAR-201ENST00000629595 1506 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 ZNF876P-202ENST00000398732 1485 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 AC007390.2-201ENST00000606229 3803 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 AL356317.1-201ENST00000396110 1436 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 RNU6-1214P-201ENST00000363650 109 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 RN7SKP103-201ENST00000363848 320 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 RNU4-68P-201ENST00000364314 141 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 SNORA2.3-201ENST00000383920 135 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 Y_RNA.472-201ENST00000384322 102 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 AL645733.1-201ENST00000402250 217 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 MIR1302-8-201ENST00000408342 128 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 VDAC1P9-201ENST00000412766 841 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 AL139128.1-201ENST00000413921 941 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 XKRYP4-201ENST00000414395 483 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 AC090960.1-201ENST00000421072 306 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 USP9YP11-201ENST00000427537 717 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 RPL7L1P9-201ENST00000431298 745 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 AL450023.3-201ENST00000440592 271 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 HMGB3P9-201ENST00000441799 583 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 RPS27P5-201ENST00000444247 244 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 XKRYP5-201ENST00000449659 483 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 RPL6P9-201ENST00000466502 859 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 RPL7AP6-201ENST00000477943 801 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 AC079841.1-201ENST00000481228 950 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 AC091951.3-201ENST00000504093 246 ntBASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGB1Q9Y5G3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms