Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.14□□□□□ -1.75
NPIPA1Q9UND3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
NPIPA1Q9UND3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NPIPA1Q9UND3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.14□□□□□ -1.75
NPIPA1Q9UND3 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NPIPA1Q9UND3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.14□□□□□ -1.75
NPIPA1Q9UND3 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.14□□□□□ -1.75
NPIPA1Q9UND3 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.14□□□□□ -1.75
NPIPA1Q9UND3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NPIPA1Q9UND3 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.14□□□□□ -1.75
NPIPA1Q9UND3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NPIPA1Q9UND3 MFSD8-242ENST00000641690 4199 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 OR4K17-201ENST00000315543 1032 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 RNU6-146P-201ENST00000384602 108 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 OR6C69P-201ENST00000394268 893 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 RPL23AP59-201ENST00000399415 461 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 RPS24P12-201ENST00000402084 394 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 RPL21P108-201ENST00000413857 481 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 AL160175.1-201ENST00000428124 247 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 AL935212.3-201ENST00000450729 284 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 HMGB1P26-201ENST00000452520 628 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 RN7SL303P-201ENST00000469773 251 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 AC108022.1-201ENST00000493466 478 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 OR9N1P-202ENST00000494289 481 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 RNU6-362P-201ENST00000516736 90 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 AC069366.1-201ENST00000583159 838 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 AC015802.5-201ENST00000607478 399 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 AC015726.3-201ENST00000624501 418 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 AC068724.3-201ENST00000625906 87 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 MAPK10-304ENST00000641341 3984 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 HSPD1P14-201ENST00000432666 1618 ntBASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
NPIPA1Q9UND3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 AC074029.4-201ENST00000624796 1859 ntBASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 RNU6-185P-201ENST00000384421 107 ntBASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 SNORD96B-201ENST00000386148 79 ntBASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 MIR1193-201ENST00000408109 78 ntBASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 SNORA11-201ENST00000408789 128 ntBASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 VDAC1P9-201ENST00000412766 841 ntBASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 TMSB10P2-201ENST00000416049 131 ntBASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 TRGV6-201ENST00000417928 299 ntBASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 NPM1P24-201ENST00000428039 894 ntBASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 RPS29P17-201ENST00000430795 166 ntBASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 RPL23AP25-201ENST00000430973 463 ntBASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 AL513343.1-201ENST00000451818 792 ntBASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 HMGB3P13-201ENST00000511263 607 ntBASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 NDUFB4P12-201ENST00000513465 390 ntBASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 AC010476.1-201ENST00000519111 851 ntBASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 CYCSP28-201ENST00000534284 321 ntBASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.12□□□□□ -1.75
NPIPA1Q9UND3 AC090515.3-201ENST00000560431 315 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms