Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 RPL7AP49-201ENST00000429522 581 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AL591438.1-201ENST00000433508 581 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 COX7BP2-201ENST00000437976 242 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AC118469.1-201ENST00000442943 488 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 MTND2P4-201ENST00000445034 1004 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 ANKRD26P4-201ENST00000455755 950 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 MTND4LP3-201ENST00000468320 276 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AC022795.1-201ENST00000473808 480 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AC004453.1-201ENST00000487895 408 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 PDCD5P1-201ENST00000543528 309 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AC087465.1-201ENST00000560574 245 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AC095057.3-201ENST00000567102 1157 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AC135628.1-201ENST00000568867 534 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 ELOCP28-201ENST00000590044 317 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 VN1R83P-201ENST00000595685 445 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 MRPS35P3-201ENST00000603189 709 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AC008814.1-201ENST00000603797 406 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 HULC.1-201ENST00000612720 240 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 AC099494.2-201ENST00000623371 978 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 MTND4P5-201ENST00000435821 1374 ntBASIC5.28□□□□□ -1.56
DKK3Q9UBP4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.28□□□□□ -1.56
DKK3Q9UBP4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AC006042.3-201ENST00000454684 1469 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 METTL21EP-201ENST00000298105 713 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 OR9G4-201ENST00000302957 984 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 RNU6-623P-201ENST00000363143 105 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 RNU6-353P-201ENST00000364266 108 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 RNU4-7P-201ENST00000364758 141 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 SNORA70.6-201ENST00000383934 134 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 Y_RNA.436-201ENST00000384097 102 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 MT-TP-201ENST00000387461 68 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 SNORA40.2-201ENST00000390847 128 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AL645733.1-201ENST00000402250 217 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 MIR1182-201ENST00000408363 97 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 RN7SKP213-201ENST00000410746 298 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 RAB28P1-201ENST00000411517 641 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 RAC1P8-201ENST00000427086 527 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 KCTD10P1-201ENST00000434203 625 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AC092170.1-201ENST00000440211 356 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AC007327.1-201ENST00000447461 264 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 CDC42P1-201ENST00000456658 548 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AC009127.1-201ENST00000467090 155 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 OR51K1P-201ENST00000510214 950 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 XKRY-201ENST00000510392 1100 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 FABP5P12-201ENST00000515543 389 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 OR5D15P-201ENST00000531671 942 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 DYNLL1P4-201ENST00000549314 266 ntBASIC5.27□□□□□ -1.57
DKK3Q9UBP4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
DKK3Q9UBP4 OR11J2P-201ENST00000555298 907 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms