Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SPASTQ9UBP0 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SPASTQ9UBP0 AL356967.1-201ENST00000406305 431 ntBASIC4.54□□□□□ -1.68
SPASTQ9UBP0 MTND2P3-201ENST00000452458 470 ntBASIC4.54□□□□□ -1.68
SPASTQ9UBP0 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.54□□□□□ -1.68
SPASTQ9UBP0 CABYRP1-201ENST00000465493 1045 ntBASIC4.54□□□□□ -1.68
SPASTQ9UBP0 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.54□□□□□ -1.68
SPASTQ9UBP0 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SPASTQ9UBP0 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.54□□□□□ -1.68
SPASTQ9UBP0 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.54□□□□□ -1.68
SPASTQ9UBP0 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SPASTQ9UBP0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.54□□□□□ -1.68
SPASTQ9UBP0 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.54□□□□□ -1.68
SPASTQ9UBP0 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.54□□□□□ -1.68
SPASTQ9UBP0 AL023881.1-201ENST00000621088 301 ntBASIC4.54□□□□□ -1.68
SPASTQ9UBP0 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
SPASTQ9UBP0 RNF6P1-201ENST00000444889 1784 ntBASIC4.54□□□□□ -1.68
SPASTQ9UBP0 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SPASTQ9UBP0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.54□□□□□ -1.68
SPASTQ9UBP0 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.54□□□□□ -1.68
SPASTQ9UBP0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SPASTQ9UBP0 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.54□□□□□ -1.68
SPASTQ9UBP0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SPASTQ9UBP0 AC092435.4-201ENST00000623012 4159 ntBASIC4.54□□□□□ -1.68
SPASTQ9UBP0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 Z73965.1-201ENST00000623412 2297 ntBASIC4.53□□□□□ -1.68
SPASTQ9UBP0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 ZNF90P1-201ENST00000480493 1951 ntBASIC4.53□□□□□ -1.68
SPASTQ9UBP0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 RNU4-25P-201ENST00000410569 230 ntBASIC4.53□□□□□ -1.68
SPASTQ9UBP0 OR51B3P-201ENST00000412287 913 ntBASIC4.53□□□□□ -1.68
SPASTQ9UBP0 AC004690.1-201ENST00000418216 328 ntBASIC4.53□□□□□ -1.68
SPASTQ9UBP0 CHIAP3-201ENST00000423668 1133 ntBASIC4.53□□□□□ -1.68
SPASTQ9UBP0 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 ARL4AP3-201ENST00000441452 574 ntBASIC4.53□□□□□ -1.68
SPASTQ9UBP0 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 AC083829.1-201ENST00000503756 657 ntBASIC4.53□□□□□ -1.68
SPASTQ9UBP0 AC113430.1-201ENST00000506872 718 ntBASIC4.53□□□□□ -1.68
SPASTQ9UBP0 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 RN7SKP122-201ENST00000515923 296 ntBASIC4.53□□□□□ -1.68
SPASTQ9UBP0 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 AC115286.1-201ENST00000604298 434 ntBASIC4.53□□□□□ -1.68
SPASTQ9UBP0 AL355802.4-201ENST00000607635 548 ntBASIC4.53□□□□□ -1.68
SPASTQ9UBP0 MLECP1-201ENST00000615893 709 ntBASIC4.53□□□□□ -1.68
SPASTQ9UBP0 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 MIR6830-201ENST00000636015 70 ntBASIC4.53□□□□□ -1.68
SPASTQ9UBP0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SPASTQ9UBP0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SPASTQ9UBP0 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.52□□□□□ -1.69
SPASTQ9UBP0 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SPASTQ9UBP0 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.52□□□□□ -1.69
SPASTQ9UBP0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SPASTQ9UBP0 AC021146.4-201ENST00000309229 279 ntBASIC4.52□□□□□ -1.69
SPASTQ9UBP0 IL6STP1-201ENST00000346911 1020 ntBASIC4.52□□□□□ -1.69
SPASTQ9UBP0 RNU1-83P-201ENST00000363426 164 ntBASIC4.52□□□□□ -1.69
SPASTQ9UBP0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
SPASTQ9UBP0 TAF9BP2-201ENST00000400856 499 ntBASIC4.52□□□□□ -1.69
SPASTQ9UBP0 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.52□□□□□ -1.69
SPASTQ9UBP0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.52□□□□□ -1.69
SPASTQ9UBP0 LINC01881-201ENST00000416103 412 ntBASIC4.52□□□□□ -1.69
SPASTQ9UBP0 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SPASTQ9UBP0 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.52□□□□□ -1.69
SPASTQ9UBP0 AL356387.2-201ENST00000422272 243 ntBASIC4.52□□□□□ -1.69
SPASTQ9UBP0 AL138785.1-201ENST00000425821 331 ntBASIC4.52□□□□□ -1.69
SPASTQ9UBP0 AL035458.1-201ENST00000433096 585 ntBASIC4.52□□□□□ -1.69
SPASTQ9UBP0 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.52□□□□□ -1.69
SPASTQ9UBP0 RPS15AP29-201ENST00000445539 400 ntBASIC4.52□□□□□ -1.69
SPASTQ9UBP0 TPRKBP1-201ENST00000456243 481 ntBASIC4.52□□□□□ -1.69
SPASTQ9UBP0 SCARNA10-201ENST00000459255 330 ntBASIC4.52□□□□□ -1.69
SPASTQ9UBP0 AC011276.1-201ENST00000469688 323 ntBASIC4.52□□□□□ -1.69
SPASTQ9UBP0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
SPASTQ9UBP0 AC104687.1-201ENST00000485829 412 ntBASIC4.52□□□□□ -1.69
SPASTQ9UBP0 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.52□□□□□ -1.69
SPASTQ9UBP0 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.52□□□□□ -1.69
SPASTQ9UBP0 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.52□□□□□ -1.69
SPASTQ9UBP0 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.52□□□□□ -1.69
SPASTQ9UBP0 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.52□□□□□ -1.69
SPASTQ9UBP0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.52□□□□□ -1.69
SPASTQ9UBP0 NF1P5-201ENST00000588287 448 ntBASIC4.52□□□□□ -1.69
SPASTQ9UBP0 AC012409.3-201ENST00000611343 981 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms