Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 AL157827.1-201ENST00000447622 132 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 EIF2S2P5-201ENST00000457635 968 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 ATP5G1P3-201ENST00000463301 410 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 RPL23AP65-201ENST00000475608 468 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 SNORA31.9-201ENST00000516429 84 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 AF186190.1-201ENST00000517470 480 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 AC134698.5-201ENST00000519444 336 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 CYCSP28-201ENST00000534284 321 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 AL352979.3-201ENST00000553515 247 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 AL109766.1-201ENST00000555080 552 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 AC025884.1-201ENST00000556034 378 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 RN7SL176P-201ENST00000580352 264 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 AC124856.1-201ENST00000600819 896 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 FAM27D1-201ENST00000612308 341 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 MIR8059-201ENST00000620427 81 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 AL445363.3-201ENST00000623080 671 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 AP003499.2-201ENST00000624100 483 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 LARP1BP1-201ENST00000506036 1359 ntBASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLCF1Q9UBD9 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 AL121657.1-201ENST00000327215 531 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 RNU1-14P-201ENST00000362759 152 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 RPL6P29-201ENST00000414863 865 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 RPL23AP38-201ENST00000423801 469 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 GTF2IP2-201ENST00000424290 697 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 MTCYBP12-201ENST00000440559 1134 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 AL672167.3-201ENST00000465951 960 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 FTH1P2-201ENST00000466086 412 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 AC025181.1-201ENST00000477507 416 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 AL161747.1-201ENST00000480068 358 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 AC093770.1-201ENST00000511559 571 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 DYNLL1P4-201ENST00000549314 266 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 MIR3160-1-201ENST00000577972 85 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 SS18L2P2-201ENST00000583960 235 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 AL137072.1-201ENST00000603444 466 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 AL161729.3-201ENST00000603533 673 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 MIR492-201ENST00000638676 116 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 MFSD8-220ENST00000641243 1422 ntBASIC3.84□□□□□ -1.79
CLCF1Q9UBD9 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
CLCF1Q9UBD9 AC017002.4-201ENST00000604721 1525 ntBASIC3.84□□□□□ -1.8
CLCF1Q9UBD9 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CLCF1Q9UBD9 AL672167.1-203ENST00000641299 2975 ntBASIC3.84□□□□□ -1.8
CLCF1Q9UBD9 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CLCF1Q9UBD9 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 OR52B1P-201ENST00000316506 909 ntBASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
CLCF1Q9UBD9 RNU6-31P-201ENST00000384388 108 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms