Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 EIF1P3-201ENST00000423841 334 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AL162151.2-201ENST00000448875 158 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 RPS29P19-201ENST00000479709 171 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AP002812.1-201ENST00000495378 474 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 PPM1AP1-201ENST00000502740 1135 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 MTND4LP31-201ENST00000514859 294 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AC090312.1-201ENST00000580637 348 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AL451049.1-201ENST00000608672 497 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 RN7SKP224-201ENST00000364140 325 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AC115285.1-201ENST00000424879 736 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AL117339.2-201ENST00000430475 180 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 Z95327.1-201ENST00000446082 482 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AC091544.1-201ENST00000484702 348 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 IPO5P1-202ENST00000600039 287 ntBASIC3.87□□□□□ -1.79
CCDC88CQ9P219 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.87□□□□□ -1.79
CCDC88CQ9P219 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 RNA5SP97-201ENST00000365006 84 ntBASIC3.86□□□□□ -1.79
CCDC88CQ9P219 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 PPIAP31-201ENST00000405422 495 ntBASIC3.86□□□□□ -1.79
CCDC88CQ9P219 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 RBMY1KP-201ENST00000423480 476 ntBASIC3.86□□□□□ -1.79
CCDC88CQ9P219 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 AC002553.2-201ENST00000453217 340 ntBASIC3.86□□□□□ -1.79
CCDC88CQ9P219 RPL21P129-201ENST00000491732 478 ntBASIC3.86□□□□□ -1.79
CCDC88CQ9P219 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 RNU6-352P-201ENST00000516908 107 ntBASIC3.86□□□□□ -1.79
CCDC88CQ9P219 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 AL591424.2-201ENST00000617023 128 ntBASIC3.86□□□□□ -1.79
CCDC88CQ9P219 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCDC88CQ9P219 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 NANOGP6-201ENST00000429190 847 ntBASIC3.85□□□□□ -1.79
CCDC88CQ9P219 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 RN7SKP141-201ENST00000516167 338 ntBASIC3.85□□□□□ -1.79
CCDC88CQ9P219 AC023632.4-201ENST00000517783 191 ntBASIC3.85□□□□□ -1.79
CCDC88CQ9P219 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 AC006064.5-201ENST00000541782 248 ntBASIC3.85□□□□□ -1.79
CCDC88CQ9P219 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 AC069157.1-201ENST00000421749 137 ntBASIC3.85□□□□□ -1.79
CCDC88CQ9P219 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.85□□□□□ -1.79
CCDC88CQ9P219 AC044797.1-201ENST00000445744 679 ntBASIC3.85□□□□□ -1.79
CCDC88CQ9P219 TRMT10BP1-201ENST00000519377 943 ntBASIC3.85□□□□□ -1.79
CCDC88CQ9P219 AC093227.2-201ENST00000589357 285 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms