Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AL138820.1-201ENST00000617901 5305 ntBASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 AC023632.6-201ENST00000624338 2177 ntBASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 RNA5SP51-201ENST00000364750 119 ntBASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 RNU2-65P-201ENST00000410162 185 ntBASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 AC096664.2-201ENST00000411843 406 ntBASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 PGBD4P8-201ENST00000412993 562 ntBASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 RPS3AP46-201ENST00000448352 682 ntBASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 PDSS1P2-201ENST00000449397 678 ntBASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 WBP1LP4-201ENST00000505043 344 ntBASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 MIR7975-201ENST00000619350 68 ntBASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHRF1Q9P1Y6 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 VN1R8P-201ENST00000407739 893 ntBASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 DYNLL1P7-201ENST00000429273 258 ntBASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 Z74696.2-201ENST00000436514 498 ntBASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 ARL4AP3-201ENST00000441452 574 ntBASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 AL358832.1-201ENST00000497800 389 ntBASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 AC025627.2-201ENST00000576220 160 ntBASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 RNU1-30P-201ENST00000606575 163 ntBASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PHRF1Q9P1Y6 AL035425.3-201ENST00000564206 4996 ntBASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 HSPD1P15-201ENST00000505573 1122 ntBASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 RN7SKP18-201ENST00000516005 275 ntBASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 RPL23AP87-202ENST00000573039 466 ntBASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 MIR5187-201ENST00000583479 76 ntBASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 AC090246.1-201ENST00000616499 426 ntBASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 GVINP1-202ENST00000531871 7271 ntBASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PHRF1Q9P1Y6 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 RPL23AP89-201ENST00000439324 255 ntBASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 AC243654.2-201ENST00000612843 443 ntBASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 AP001002.2-201ENST00000625137 386 ntBASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 Z95327.2-201ENST00000414579 1873 ntBASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.27□□□□□ -1.57
PHRF1Q9P1Y6 SNORD35B-201ENST00000363660 87 ntBASIC5.26□□□□□ -1.57
PHRF1Q9P1Y6 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.26□□□□□ -1.57
PHRF1Q9P1Y6 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.26□□□□□ -1.57
PHRF1Q9P1Y6 SEPT7P8-201ENST00000413308 775 ntBASIC5.26□□□□□ -1.57
PHRF1Q9P1Y6 HSPD1P21-201ENST00000436541 245 ntBASIC5.26□□□□□ -1.57
PHRF1Q9P1Y6 CYCSP32-201ENST00000440548 321 ntBASIC5.26□□□□□ -1.57
PHRF1Q9P1Y6 PSMC1P13-201ENST00000458195 985 ntBASIC5.26□□□□□ -1.57
PHRF1Q9P1Y6 AC106707.2-201ENST00000484182 374 ntBASIC5.26□□□□□ -1.57
PHRF1Q9P1Y6 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.26□□□□□ -1.57
PHRF1Q9P1Y6 AC008802.1-201ENST00000519121 791 ntBASIC5.26□□□□□ -1.57
PHRF1Q9P1Y6 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms