Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 USP8P1-201ENST00000494673 3183 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 TRIM51GP-201ENST00000534741 1350 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AC116667.1-201ENST00000604855 2072 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AC013429.2-201ENST00000418798 781 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 ISCA1P6-201ENST00000427740 390 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 RPL27AP5-201ENST00000469428 449 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AC096576.1-201ENST00000489014 359 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AC006960.3-201ENST00000561845 705 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 MIR5187-201ENST00000583479 76 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AC103881.1-201ENST00000603476 538 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 Z98200.1-201ENST00000607298 470 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CHD8Q9HCK8 Z82217.1-201ENST00000625157 8149 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 AC068870.3-201ENST00000625077 2536 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 MAPK10-349ENST00000641767 3661 ntBASIC3.81□□□□□ -1.8
CHD8Q9HCK8 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 BX842559.1-201ENST00000419615 532 ntBASIC3.8□□□□□ -1.8
CHD8Q9HCK8 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 AC092641.1-201ENST00000440229 772 ntBASIC3.8□□□□□ -1.8
CHD8Q9HCK8 HMGB3P9-201ENST00000441799 583 ntBASIC3.8□□□□□ -1.8
CHD8Q9HCK8 RPS11P1-201ENST00000451072 473 ntBASIC3.8□□□□□ -1.8
CHD8Q9HCK8 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 BMS1P21-201ENST00000634565 365 ntBASIC3.8□□□□□ -1.8
CHD8Q9HCK8 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 KCNMB3P1-202ENST00000493696 3389 ntBASIC3.8□□□□□ -1.8
CHD8Q9HCK8 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 Z74021.1-201ENST00000423610 407 ntBASIC3.8□□□□□ -1.8
CHD8Q9HCK8 CCRL1P1-201ENST00000449542 1053 ntBASIC3.8□□□□□ -1.8
CHD8Q9HCK8 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 RPS3AP6-201ENST00000484430 795 ntBASIC3.8□□□□□ -1.8
CHD8Q9HCK8 AK4P6-201ENST00000505168 528 ntBASIC3.8□□□□□ -1.8
CHD8Q9HCK8 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 AC244258.1-201ENST00000637553 1071 ntBASIC3.8□□□□□ -1.8
CHD8Q9HCK8 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 AP001284.1-201ENST00000528393 2118 ntBASIC3.8□□□□□ -1.8
CHD8Q9HCK8 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CHD8Q9HCK8 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 U1.1-201ENST00000384101 164 ntBASIC3.79□□□□□ -1.8
CHD8Q9HCK8 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 AC104333.2-201ENST00000422630 192 ntBASIC3.79□□□□□ -1.8
CHD8Q9HCK8 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 AL591503.2-201ENST00000442314 1005 ntBASIC3.79□□□□□ -1.8
CHD8Q9HCK8 RN7SKP248-201ENST00000516278 305 ntBASIC3.79□□□□□ -1.8
CHD8Q9HCK8 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 AC006064.5-201ENST00000541782 248 ntBASIC3.79□□□□□ -1.8
CHD8Q9HCK8 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 AC007066.2-202ENST00000566531 914 ntBASIC3.79□□□□□ -1.8
CHD8Q9HCK8 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 MIR7-2-201ENST00000384970 110 ntBASIC3.79□□□□□ -1.8
CHD8Q9HCK8 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.79□□□□□ -1.8
CHD8Q9HCK8 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.79□□□□□ -1.8
CHD8Q9HCK8 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms