Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 HMGN2P36-201ENST00000529541 409 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS11Q9H270 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS11Q9H270 AP000873.5-201ENST00000533906 236 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 OR8L1P-201ENST00000534005 955 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS11Q9H270 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.58□□□□□ -1.52
VPS11Q9H270 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS11Q9H270 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS11Q9H270 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.58□□□□□ -1.52
VPS11Q9H270 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.58□□□□□ -1.52
VPS11Q9H270 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS11Q9H270 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.58□□□□□ -1.52
VPS11Q9H270 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS11Q9H270 CYP2C60P-201ENST00000566088 139 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS11Q9H270 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS11Q9H270 C8orf59P2-201ENST00000603441 271 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 AL445423.1-201ENST00000609941 536 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 AC243654.2-201ENST00000612843 443 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 AC010678.1-201ENST00000614118 713 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 AC138965.3-201ENST00000623875 498 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 AC016717.3-201ENST00000624730 554 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
VPS11Q9H270 MAPK10-338ENST00000641647 3362 ntBASIC5.58□□□□□ -1.52
VPS11Q9H270 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
VPS11Q9H270 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
VPS11Q9H270 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS11Q9H270 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.58□□□□□ -1.52
VPS11Q9H270 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
VPS11Q9H270 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
VPS11Q9H270 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.58□□□□□ -1.52
VPS11Q9H270 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
VPS11Q9H270 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS11Q9H270 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS11Q9H270 AL078621.3-201ENST00000623707 2042 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS11Q9H270 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS11Q9H270 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS11Q9H270 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS11Q9H270 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS11Q9H270 FAM3C2-201ENST00000312214 681 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS11Q9H270 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS11Q9H270 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS11Q9H270 RNU6-157P-201ENST00000383957 107 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 RNU6-224P-201ENST00000384055 107 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 MCTS2P-201ENST00000394552 546 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 VDAC2P1-201ENST00000399358 958 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 ERHP2-201ENST00000402323 299 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 AL031577.2-201ENST00000404133 280 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 RNU2-41P-201ENST00000410991 178 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 RN7SKP142-201ENST00000411236 328 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 HMGN1P14-201ENST00000412459 517 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 MTATP6P27-201ENST00000416987 621 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 AC098592.1-201ENST00000419352 333 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 AC073069.1-201ENST00000428657 441 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 HSPD1P12-201ENST00000429127 1069 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 RPL7P56-201ENST00000429441 717 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 RPL7AP49-201ENST00000429522 581 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.57□□□□□ -1.52
VPS11Q9H270 AL591438.1-201ENST00000433508 581 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 TRIM60P8Y-201ENST00000436338 762 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS11Q9H270 PTGES3P1-201ENST00000439531 483 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS11Q9H270 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS11Q9H270 GAPDHP14-201ENST00000450472 937 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 AC003071.1-201ENST00000451219 789 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 AC233982.1-201ENST00000451247 436 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 DNAJC19P8-201ENST00000452887 259 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS11Q9H270 RNU7-140P-201ENST00000459546 60 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS11Q9H270 AC068228.1-201ENST00000461723 211 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS11Q9H270 AC005165.2-201ENST00000466070 380 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 SETP11-201ENST00000473027 690 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 AL049874.2-201ENST00000492636 288 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 AC079382.1-201ENST00000493346 557 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 RPS6P4-201ENST00000494693 758 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
VPS11Q9H270 AC096751.1-202ENST00000502691 1067 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS11Q9H270 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS11Q9H270 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS11Q9H270 AC005178.1-201ENST00000508392 440 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS11Q9H270 AC008885.2-201ENST00000509506 930 ntBASIC5.57□□□□□ -1.52
VPS11Q9H270 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
VPS11Q9H270 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS11Q9H270 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS11Q9H270 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.57□□□□□ -1.52
VPS11Q9H270 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS11Q9H270 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC5.57□□□□□ -1.52
VPS11Q9H270 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
VPS11Q9H270 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.57□□□□□ -1.52
VPS11Q9H270 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms