Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SCAPERQ9BY12 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SCAPERQ9BY12 EEF1A1P42-201ENST00000613436 1331 ntBASIC6.09□□□□□ -1.43
SCAPERQ9BY12 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC6.09□□□□□ -1.44
SCAPERQ9BY12 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
SCAPERQ9BY12 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
SCAPERQ9BY12 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
SCAPERQ9BY12 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 SNORD96B-201ENST00000386148 79 ntBASIC6.08□□□□□ -1.44
SCAPERQ9BY12 RPS29P4-201ENST00000414733 161 ntBASIC6.08□□□□□ -1.44
SCAPERQ9BY12 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 AL159987.2-201ENST00000432754 307 ntBASIC6.08□□□□□ -1.44
SCAPERQ9BY12 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 RN7SL293P-201ENST00000481765 281 ntBASIC6.08□□□□□ -1.44
SCAPERQ9BY12 RNA5SP179-201ENST00000517284 121 ntBASIC6.08□□□□□ -1.44
SCAPERQ9BY12 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 MIR5195-201ENST00000583555 115 ntBASIC6.08□□□□□ -1.44
SCAPERQ9BY12 U3.45-201ENST00000607547 219 ntBASIC6.08□□□□□ -1.44
SCAPERQ9BY12 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 AP004289.2-201ENST00000444413 1457 ntBASIC6.08□□□□□ -1.44
SCAPERQ9BY12 AL672167.1-203ENST00000641299 2975 ntBASIC6.08□□□□□ -1.44
SCAPERQ9BY12 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 SNORD3H-201ENST00000384486 214 ntBASIC6.08□□□□□ -1.44
SCAPERQ9BY12 RNVU1-14-201ENST00000384770 164 ntBASIC6.08□□□□□ -1.44
SCAPERQ9BY12 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 Z92545.1-201ENST00000411782 234 ntBASIC6.08□□□□□ -1.44
SCAPERQ9BY12 AL161631.1-201ENST00000417933 486 ntBASIC6.08□□□□□ -1.44
SCAPERQ9BY12 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 AC091167.4-201ENST00000605079 184 ntBASIC6.08□□□□□ -1.44
SCAPERQ9BY12 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.08□□□□□ -1.44
SCAPERQ9BY12 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCAPERQ9BY12 AL672167.1-205ENST00000641112 3080 ntBASIC6.07□□□□□ -1.44
SCAPERQ9BY12 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.07□□□□□ -1.44
SCAPERQ9BY12 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SCAPERQ9BY12 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SCAPERQ9BY12 AC083843.3-201ENST00000623679 2186 ntBASIC6.07□□□□□ -1.44
SCAPERQ9BY12 EOGT-210ENST00000615922 1931 ntBASIC6.07□□□□□ -1.44
SCAPERQ9BY12 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCAPERQ9BY12 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SCAPERQ9BY12 AC245052.5-201ENST00000416320 649 ntBASIC6.07□□□□□ -1.44
SCAPERQ9BY12 Z97055.1-201ENST00000419730 712 ntBASIC6.07□□□□□ -1.44
SCAPERQ9BY12 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.07□□□□□ -1.44
SCAPERQ9BY12 RPL7P4-203ENST00000430239 730 ntBASIC6.07□□□□□ -1.44
SCAPERQ9BY12 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.07□□□□□ -1.44
SCAPERQ9BY12 AC092447.2-201ENST00000435487 669 ntBASIC6.07□□□□□ -1.44
SCAPERQ9BY12 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCAPERQ9BY12 AL133162.1-201ENST00000463228 453 ntBASIC6.07□□□□□ -1.44
SCAPERQ9BY12 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
SCAPERQ9BY12 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SCAPERQ9BY12 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.07□□□□□ -1.44
SCAPERQ9BY12 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC6.07□□□□□ -1.44
SCAPERQ9BY12 AC104619.4-201ENST00000510773 249 ntBASIC6.07□□□□□ -1.44
SCAPERQ9BY12 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.07□□□□□ -1.44
SCAPERQ9BY12 AC025627.2-201ENST00000576220 160 ntBASIC6.07□□□□□ -1.44
SCAPERQ9BY12 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC6.07□□□□□ -1.44
SCAPERQ9BY12 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
SCAPERQ9BY12 MTND5P1-201ENST00000445440 1375 ntBASIC6.06□□□□□ -1.44
SCAPERQ9BY12 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SCAPERQ9BY12 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SCAPERQ9BY12 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.06□□□□□ -1.44
SCAPERQ9BY12 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SCAPERQ9BY12 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SCAPERQ9BY12 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SCAPERQ9BY12 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SCAPERQ9BY12 MTCO1P12-201ENST00000414273 1543 ntBASIC6.06□□□□□ -1.44
SCAPERQ9BY12 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC6.06□□□□□ -1.44
SCAPERQ9BY12 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC6.06□□□□□ -1.44
SCAPERQ9BY12 RNA5SP399-201ENST00000364003 117 ntBASIC6.06□□□□□ -1.44
SCAPERQ9BY12 HSFY1P1-201ENST00000423928 1178 ntBASIC6.06□□□□□ -1.44
SCAPERQ9BY12 CYCSP53-201ENST00000455540 265 ntBASIC6.06□□□□□ -1.44
SCAPERQ9BY12 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.06□□□□□ -1.44
SCAPERQ9BY12 AL358832.1-201ENST00000497800 389 ntBASIC6.06□□□□□ -1.44
SCAPERQ9BY12 OR8I1P-201ENST00000529291 931 ntBASIC6.06□□□□□ -1.44
SCAPERQ9BY12 DUX4L52-201ENST00000549363 777 ntBASIC6.06□□□□□ -1.44
SCAPERQ9BY12 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.06□□□□□ -1.44
SCAPERQ9BY12 AL353600.1-201ENST00000608148 251 ntBASIC6.06□□□□□ -1.44
SCAPERQ9BY12 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.06□□□□□ -1.44
SCAPERQ9BY12 AC073530.2-201ENST00000623987 261 ntBASIC6.06□□□□□ -1.44
SCAPERQ9BY12 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC6.06□□□□□ -1.44
SCAPERQ9BY12 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
SCAPERQ9BY12 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SCAPERQ9BY12 Z95331.1-201ENST00000623075 23112 ntBASIC6.06□□□□□ -1.44
SCAPERQ9BY12 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SCAPERQ9BY12 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SCAPERQ9BY12 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SCAPERQ9BY12 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms