Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC079768.1-201ENST00000503181 711 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 AC022493.2-201ENST00000506122 481 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 RNU1-54P-201ENST00000517181 120 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 AC022616.4-201ENST00000522985 181 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 TIMM9-205ENST00000555404 430 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USB1Q9BQ65 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 AP001120.4-201ENST00000590231 108 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 RPL23AP92-201ENST00000603609 255 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 AL391903.2-201ENST00000614532 247 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 AC025034.2-201ENST00000623264 286 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 AL731566.1-201ENST00000620490 1937 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USB1Q9BQ65 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USB1Q9BQ65 MTCO1P24-201ENST00000515438 1558 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 CCDC150P1-201ENST00000537123 2215 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
USB1Q9BQ65 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
USB1Q9BQ65 MAPK10-319ENST00000641459 2542 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
USB1Q9BQ65 AC027097.2-201ENST00000588925 1976 ntTSL 2 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 AC233263.6-201ENST00000631132 1963 ntBASIC6.77□□□□□ -1.33
USB1Q9BQ65 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
USB1Q9BQ65 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.77□□□□□ -1.33
USB1Q9BQ65 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
USB1Q9BQ65 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
USB1Q9BQ65 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
USB1Q9BQ65 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
USB1Q9BQ65 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
USB1Q9BQ65 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
USB1Q9BQ65 ZNF667-202ENST00000504904 4390 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
USB1Q9BQ65 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
USB1Q9BQ65 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 RNU6-1287P-201ENST00000362914 107 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 SNORA20.1-201ENST00000364790 130 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 RNU6-1060P-201ENST00000384664 107 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 TRAV8-3-201ENST00000390435 341 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 RNU6-278P-201ENST00000390945 109 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 RPL9P21-201ENST00000392269 505 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
USB1Q9BQ65 AL355375.1-201ENST00000405686 392 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 RNU2-23P-201ENST00000410545 195 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 ELOBP4-201ENST00000423418 296 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 EEF1A1P27-201ENST00000429983 1135 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 DDX11L10-201ENST00000430178 571 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 FDPSP8-201ENST00000438304 1089 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 CEACAMP9-201ENST00000442990 513 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 AC011742.2-201ENST00000443818 352 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 TCEAL4P1-201ENST00000453620 588 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 RPS18P13-201ENST00000461260 454 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 RN7SL36P-201ENST00000469345 276 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 NDUFS5P2-201ENST00000484004 306 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 RN7SL869P-201ENST00000497032 300 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 RNU6-1023P-201ENST00000516137 106 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 RN7SKP2-201ENST00000517003 319 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 IGKV3D-31-201ENST00000519131 281 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 MTND6P19-201ENST00000519399 524 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 OR7E87P-201ENST00000532397 929 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 COX6CP11-201ENST00000555293 229 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 AC110743.1-201ENST00000584870 478 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
USB1Q9BQ65 RPS28P1-201ENST00000604589 187 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 AL359195.2-201ENST00000623657 4412 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
USB1Q9BQ65 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
USB1Q9BQ65 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.76□□□□□ -1.33
USB1Q9BQ65 THAP12P4-201ENST00000528321 2266 ntBASIC6.76□□□□□ -1.33
USB1Q9BQ65 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms