Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 UBE2V1P6-201ENST00000430840 422 ntBASIC4.86□□□□□ -1.63
RAD9AQ99638 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.86□□□□□ -1.63
RAD9AQ99638 RNA5SP103-201ENST00000459503 118 ntBASIC4.86□□□□□ -1.63
RAD9AQ99638 RNU6-1102P-201ENST00000516149 96 ntBASIC4.86□□□□□ -1.63
RAD9AQ99638 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.86□□□□□ -1.63
RAD9AQ99638 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.86□□□□□ -1.63
RAD9AQ99638 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.86□□□□□ -1.63
RAD9AQ99638 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.86□□□□□ -1.63
RAD9AQ99638 AGGF1P6-201ENST00000569213 976 ntBASIC4.86□□□□□ -1.63
RAD9AQ99638 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.86□□□□□ -1.63
RAD9AQ99638 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.86□□□□□ -1.63
RAD9AQ99638 ZNF92P2-201ENST00000600543 1059 ntBASIC4.86□□□□□ -1.63
RAD9AQ99638 AC005776.1-201ENST00000603164 290 ntBASIC4.86□□□□□ -1.63
RAD9AQ99638 AC113403.1-201ENST00000604910 193 ntBASIC4.86□□□□□ -1.63
RAD9AQ99638 BNIP3P19-201ENST00000605397 577 ntBASIC4.86□□□□□ -1.63
RAD9AQ99638 uc_338.13-201ENST00000618243 179 ntBASIC4.86□□□□□ -1.63
RAD9AQ99638 MIR8059-201ENST00000620427 81 ntBASIC4.86□□□□□ -1.63
RAD9AQ99638 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.86□□□□□ -1.63
RAD9AQ99638 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.86□□□□□ -1.63
RAD9AQ99638 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.86□□□□□ -1.63
RAD9AQ99638 DDX18P5-201ENST00000534547 1306 ntBASIC4.86□□□□□ -1.63
RAD9AQ99638 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
RAD9AQ99638 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
RAD9AQ99638 AL391684.1-202ENST00000641293 1636 ntBASIC4.86□□□□□ -1.63
RAD9AQ99638 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
RAD9AQ99638 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RAD9AQ99638 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.85□□□□□ -1.63
RAD9AQ99638 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.85□□□□□ -1.63
RAD9AQ99638 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
RAD9AQ99638 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAD9AQ99638 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAD9AQ99638 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.85□□□□□ -1.63
RAD9AQ99638 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
RAD9AQ99638 RN7SKP97-201ENST00000410966 333 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.85□□□□□ -1.63
RAD9AQ99638 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.85□□□□□ -1.63
RAD9AQ99638 E2F6P2-201ENST00000420708 748 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 ARL2BPP3-201ENST00000421226 480 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 OR2AH1P-201ENST00000425717 928 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.85□□□□□ -1.63
RAD9AQ99638 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.85□□□□□ -1.63
RAD9AQ99638 RPL23AP43-201ENST00000446445 471 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.85□□□□□ -1.63
RAD9AQ99638 DHFRP3-201ENST00000455595 559 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 APOOP2-201ENST00000461561 539 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 MTND3P3-201ENST00000505004 126 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.85□□□□□ -1.63
RAD9AQ99638 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.85□□□□□ -1.63
RAD9AQ99638 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.85□□□□□ -1.63
RAD9AQ99638 MTND4LP31-201ENST00000514859 294 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 AC023632.4-201ENST00000517783 191 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.85□□□□□ -1.63
RAD9AQ99638 VTA1P2-201ENST00000520205 911 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.85□□□□□ -1.63
RAD9AQ99638 AC004923.2-201ENST00000529649 369 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.85□□□□□ -1.63
RAD9AQ99638 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAD9AQ99638 AC093014.1-201ENST00000548926 724 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 AL049830.4-201ENST00000555149 351 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.85□□□□□ -1.63
RAD9AQ99638 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.85□□□□□ -1.63
RAD9AQ99638 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.85□□□□□ -1.63
RAD9AQ99638 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.85□□□□□ -1.63
RAD9AQ99638 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.85□□□□□ -1.63
RAD9AQ99638 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.85□□□□□ -1.63
RAD9AQ99638 AC092953.2-201ENST00000608000 699 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 AC015914.2-201ENST00000618167 288 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 AC022106.2-201ENST00000620114 757 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 AC090617.9-201ENST00000623751 147 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 AC112484.5-201ENST00000624189 228 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 AP003497.2-201ENST00000624220 967 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAD9AQ99638 SMG1P4-204ENST00000523028 4131 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 AL359715.4-201ENST00000606629 1436 ntBASIC4.85□□□□□ -1.63
RAD9AQ99638 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RAD9AQ99638 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.85□□□□□ -1.63
RAD9AQ99638 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAD9AQ99638 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAD9AQ99638 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
RAD9AQ99638 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.85□□□□□ -1.63
RAD9AQ99638 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.85□□□□□ -1.63
RAD9AQ99638 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RAD9AQ99638 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RAD9AQ99638 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.84□□□□□ -1.63
RAD9AQ99638 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RAD9AQ99638 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RAD9AQ99638 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RAD9AQ99638 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
RAD9AQ99638 AC093535.2-201ENST00000624769 2326 ntBASIC4.84□□□□□ -1.63
RAD9AQ99638 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RAD9AQ99638 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.84□□□□□ -1.63
RAD9AQ99638 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.84□□□□□ -1.63
RAD9AQ99638 RNU6-650P-201ENST00000365658 111 ntBASIC4.84□□□□□ -1.63
RAD9AQ99638 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.84□□□□□ -1.63
RAD9AQ99638 SNORA11F-201ENST00000408237 128 ntBASIC4.84□□□□□ -1.63
RAD9AQ99638 EIF4A1P3-201ENST00000411521 244 ntBASIC4.84□□□□□ -1.63
RAD9AQ99638 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.84□□□□□ -1.63
RAD9AQ99638 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
RAD9AQ99638 AC099336.2-201ENST00000422457 254 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms