Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 MIR6730-201ENST00000622213 67 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS50Q96JG6 MIR1322-201ENST00000638013 71 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 CASC19-206ENST00000641028 1430 ntBASIC5.1□□□□□ -1.59
VPS50Q96JG6 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS50Q96JG6 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS50Q96JG6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC093535.2-201ENST00000624769 2326 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 DDX18P3-201ENST00000404856 2007 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC006042.3-201ENST00000454684 1469 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS50Q96JG6 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS50Q96JG6 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS50Q96JG6 NACA3P-201ENST00000359690 648 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS50Q96JG6 MIR525-201ENST00000384978 85 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 PTP4A1P5-201ENST00000420305 455 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC108075.1-201ENST00000424692 529 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 OR2AH1P-201ENST00000425717 928 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 OR5AW1P-201ENST00000426334 1006 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS50Q96JG6 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 CNOT7P2-201ENST00000441051 832 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 CYCSP24-201ENST00000445119 316 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 PTMAP3-201ENST00000447474 330 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC108471.1-201ENST00000513977 287 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 FABP5P12-201ENST00000515543 389 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 RNU6-416P-201ENST00000516265 103 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 RNA5SP92-201ENST00000516437 110 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC023632.1-201ENST00000518463 375 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 OR8G3P-201ENST00000533406 921 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC092747.2-201ENST00000545069 983 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC126177.5-201ENST00000549599 178 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 POLR2KP1-201ENST00000553226 168 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 AADACP1-206ENST00000561502 1193 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC010620.1-201ENST00000601088 1102 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC064807.4-201ENST00000607201 407 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 AL360219.1-201ENST00000610230 366 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC126915.2-201ENST00000610957 190 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 AC109454.4-201ENST00000623411 649 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 AL512506.2-201ENST00000624472 458 ntBASIC5.09□□□□□ -1.59
VPS50Q96JG6 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS50Q96JG6 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS50Q96JG6 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
VPS50Q96JG6 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
VPS50Q96JG6 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.09□□□□□ -1.6
VPS50Q96JG6 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
VPS50Q96JG6 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.09□□□□□ -1.6
VPS50Q96JG6 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS50Q96JG6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS50Q96JG6 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS50Q96JG6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC235565.1-201ENST00000456962 1325 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 DDX18P5-201ENST00000534547 1306 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS50Q96JG6 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 IGKV7-3-201ENST00000357453 298 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 RNU6-1339P-201ENST00000363574 91 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS50Q96JG6 OR1L1-202ENST00000373686 1083 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 RNU1-149P-201ENST00000390870 161 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 RNA5SP339-201ENST00000390987 122 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 RAP1BP1-201ENST00000412709 553 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 AC099336.2-201ENST00000422457 254 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 SRSF1P1-201ENST00000424058 520 ntBASIC5.08□□□□□ -1.6
VPS50Q96JG6 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS50Q96JG6 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS50Q96JG6 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms