Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.92□□□□□ -1.46
ERCC4Q92889 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.92□□□□□ -1.46
ERCC4Q92889 HMGB1P44-201ENST00000508597 572 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.92□□□□□ -1.46
ERCC4Q92889 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.92□□□□□ -1.46
ERCC4Q92889 AC116353.3-201ENST00000511215 249 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.92□□□□□ -1.46
ERCC4Q92889 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.92□□□□□ -1.46
ERCC4Q92889 NRBF2P4-201ENST00000520874 850 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 AC112191.2-201ENST00000522428 333 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.92□□□□□ -1.46
ERCC4Q92889 AC092747.2-201ENST00000545069 983 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.92□□□□□ -1.46
ERCC4Q92889 AL391156.1-201ENST00000554965 554 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.92□□□□□ -1.46
ERCC4Q92889 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.92□□□□□ -1.46
ERCC4Q92889 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.92□□□□□ -1.46
ERCC4Q92889 AC116553.2-201ENST00000564203 463 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.92□□□□□ -1.46
ERCC4Q92889 AC010547.6-201ENST00000571789 193 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 MIR4505-201ENST00000582238 73 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC5.92□□□□□ -1.46
ERCC4Q92889 AC011445.2-201ENST00000599274 173 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 AC004987.4-201ENST00000603383 338 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 AC104073.3-201ENST00000610942 955 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 AC023158.2-201ENST00000614876 543 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 AC109583.2-201ENST00000617367 129 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 AC022509.4-201ENST00000621404 572 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.92□□□□□ -1.46
ERCC4Q92889 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ERCC4Q92889 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
ERCC4Q92889 THAP12P5-201ENST00000405864 2275 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
ERCC4Q92889 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ERCC4Q92889 ECM1P2-201ENST00000503354 1577 ntBASIC5.92□□□□□ -1.46
ERCC4Q92889 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
ERCC4Q92889 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ERCC4Q92889 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
ERCC4Q92889 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ERCC4Q92889 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.91□□□□□ -1.46
ERCC4Q92889 AL356473.1-201ENST00000406203 1408 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 RBPJP2-201ENST00000618187 1444 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
ERCC4Q92889 AL731532.2-201ENST00000623542 1953 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.91□□□□□ -1.46
ERCC4Q92889 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
ERCC4Q92889 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
ERCC4Q92889 MIR323A-201ENST00000362199 86 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 OR1L1-202ENST00000373686 1083 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC4Q92889 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.91□□□□□ -1.46
ERCC4Q92889 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC4Q92889 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC4Q92889 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.91□□□□□ -1.46
ERCC4Q92889 RNA5SP487-201ENST00000410186 122 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 Y_RNA.619-201ENST00000410951 90 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 RN7SKP247-201ENST00000411094 308 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 AC092745.2-202ENST00000411880 369 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 AC211486.3-201ENST00000412694 621 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 OR2AT2P-201ENST00000413438 905 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 LINC01881-201ENST00000416103 412 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 Z93019.1-201ENST00000416450 973 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 AL139421.1-201ENST00000423010 169 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.91□□□□□ -1.46
ERCC4Q92889 RPL12P17-201ENST00000432393 498 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 HMGB1P45-201ENST00000435986 653 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.91□□□□□ -1.46
ERCC4Q92889 GTF3AP5-201ENST00000442645 697 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC4Q92889 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.91□□□□□ -1.46
ERCC4Q92889 AC079776.3-201ENST00000450665 370 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC4Q92889 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.91□□□□□ -1.46
ERCC4Q92889 RN7SL174P-201ENST00000475578 289 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 RN7SL101P-201ENST00000496350 279 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 AC090638.1-201ENST00000498296 909 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.91□□□□□ -1.46
ERCC4Q92889 AC073358.1-201ENST00000505671 684 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 AC005178.1-201ENST00000508392 440 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.91□□□□□ -1.46
ERCC4Q92889 AC104108.1-201ENST00000509930 412 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 AC010625.1-201ENST00000511296 403 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 UBE2NP1-201ENST00000545592 458 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.91□□□□□ -1.46
ERCC4Q92889 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.91□□□□□ -1.46
ERCC4Q92889 MIR1273E-201ENST00000581165 102 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 MIR3936-201ENST00000584304 110 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.91□□□□□ -1.46
ERCC4Q92889 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
ERCC4Q92889 DEFB131E-202ENST00000602581 683 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 AC011453.2-201ENST00000603737 729 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.91□□□□□ -1.46
ERCC4Q92889 AP005137.2-201ENST00000609238 400 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ERCC4Q92889 MIR6862-1-201ENST00000613016 70 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 MIR6862-2-201ENST00000614755 70 ntBASIC5.91□□□□□ -1.46
ERCC4Q92889 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms