Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AC135352.1-201ENST00000506173 1418 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 RN7SKP95-201ENST00000362860 303 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 RNU6-932P-201ENST00000391108 106 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AL645733.1-201ENST00000402250 217 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 ZNF602P-201ENST00000405929 924 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 MTCO2P23-201ENST00000425216 680 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 USP12PY-201ENST00000427677 1064 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AC073587.1-201ENST00000447093 876 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 NPM1P39-201ENST00000449818 867 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 RPS5P7-201ENST00000456664 608 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AC096741.1-201ENST00000472250 846 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 GAPDHP56-201ENST00000506031 988 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 RN7SKP147-201ENST00000517154 244 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AC100770.1-201ENST00000532310 322 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 NPM1P35-201ENST00000533043 868 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 OR1F2P-201ENST00000570470 933 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 MIR4646-201ENST00000580775 63 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AC008147.4-201ENST00000617570 1204 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 AC131971.1-201ENST00000332881 1482 ntBASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SLC44A1Q8WWI5 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.65□□□□□ -1.66
SLC44A1Q8WWI5 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.65□□□□□ -1.66
SLC44A1Q8WWI5 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.65□□□□□ -1.66
SLC44A1Q8WWI5 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SLC44A1Q8WWI5 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
SLC44A1Q8WWI5 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.65□□□□□ -1.66
SLC44A1Q8WWI5 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.65□□□□□ -1.66
SLC44A1Q8WWI5 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.65□□□□□ -1.66
SLC44A1Q8WWI5 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.65□□□□□ -1.66
SLC44A1Q8WWI5 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 MIR142-201ENST00000384835 87 ntBASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 ATP5F1P2-201ENST00000398143 760 ntBASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 RN7SKP222-201ENST00000410651 315 ntBASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AC105402.1-201ENST00000413336 545 ntBASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 RBMY2QP-201ENST00000429799 1147 ntBASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AC010733.1-201ENST00000451515 401 ntBASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AC008280.2-201ENST00000455473 307 ntBASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AC090013.1-201ENST00000485147 480 ntBASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 SCARNA22-201ENST00000503991 125 ntBASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 OR5AK3P-201ENST00000527486 1297 ntBASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 PDCD5P1-201ENST00000543528 309 ntBASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 CYB5AP5-201ENST00000549779 389 ntBASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 MTND1P24-201ENST00000552175 861 ntBASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AC011611.5-201ENST00000552477 578 ntBASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 MIR4509-3-201ENST00000578671 94 ntBASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 MIR4436B2-201ENST00000581415 91 ntBASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 MIR4436B1-201ENST00000583272 91 ntBASIC4.65□□□□□ -1.67
SLC44A1Q8WWI5 MIR4509-2-201ENST00000583920 94 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms