Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.15□□□□□ -1.42
SMC1BQ8NDV3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC6.15□□□□□ -1.42
SMC1BQ8NDV3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.15□□□□□ -1.42
SMC1BQ8NDV3 AADACP1-206ENST00000561502 1193 ntBASIC6.15□□□□□ -1.42
SMC1BQ8NDV3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.15□□□□□ -1.42
SMC1BQ8NDV3 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC6.15□□□□□ -1.42
SMC1BQ8NDV3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC6.15□□□□□ -1.42
SMC1BQ8NDV3 EIF1P6-201ENST00000600054 334 ntBASIC6.15□□□□□ -1.42
SMC1BQ8NDV3 AC010620.1-201ENST00000601088 1102 ntBASIC6.15□□□□□ -1.42
SMC1BQ8NDV3 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.15□□□□□ -1.42
SMC1BQ8NDV3 AL392112.1-201ENST00000605115 829 ntBASIC6.15□□□□□ -1.42
SMC1BQ8NDV3 AL158042.1-201ENST00000605338 460 ntBASIC6.15□□□□□ -1.42
SMC1BQ8NDV3 AP003392.5-201ENST00000607857 415 ntBASIC6.15□□□□□ -1.42
SMC1BQ8NDV3 AL158163.2-201ENST00000619110 700 ntBASIC6.15□□□□□ -1.42
SMC1BQ8NDV3 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SMC1BQ8NDV3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC6.15□□□□□ -1.42
SMC1BQ8NDV3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
SMC1BQ8NDV3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.15□□□□□ -1.43
SMC1BQ8NDV3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SMC1BQ8NDV3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.15□□□□□ -1.43
SMC1BQ8NDV3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SMC1BQ8NDV3 AC005005.4-201ENST00000623789 16698 ntBASIC6.15□□□□□ -1.43
SMC1BQ8NDV3 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SMC1BQ8NDV3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SMC1BQ8NDV3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 RLIMP2-201ENST00000427891 1563 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 AC005224.3-201ENST00000584683 2140 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 BCORP1-203ENST00000513194 5093 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 RNA5SP326-201ENST00000363209 110 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 RNA5SP447-201ENST00000363749 119 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 MIR129-1-201ENST00000384972 72 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 RN7SKP222-201ENST00000410651 315 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 AC096921.1-201ENST00000411661 375 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 RAP1BP1-201ENST00000412709 553 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 AP001324.1-201ENST00000428553 399 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 FGF7P5-201ENST00000441829 291 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 RHEBP2-201ENST00000450289 600 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 MTND2P28-201ENST00000457540 1044 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 AC118282.2-201ENST00000508739 374 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 ENPP7P9-201ENST00000514456 627 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 AP002812.4-201ENST00000532139 286 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 AC015726.1-201ENST00000602353 681 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 BNIP3P4-201ENST00000604946 565 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 AC009090.3-201ENST00000616553 565 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 AL603755.1-201ENST00000619504 163 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 DDX18P5-201ENST00000534547 1306 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 AC006042.3-201ENST00000454684 1469 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 MAPK10-338ENST00000641647 3362 ntBASIC6.14□□□□□ -1.43
SMC1BQ8NDV3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 SNORA70.4-201ENST00000365509 134 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 RNU6-98P-201ENST00000384173 107 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 RNA5SP44-201ENST00000410446 133 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 RN7SKP106-201ENST00000410832 272 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 BX510359.2-201ENST00000417920 305 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 RNGTTP1-201ENST00000420965 728 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 BX276092.6-201ENST00000430476 250 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 CYCSP11-201ENST00000436426 315 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 UBE2D3P1-201ENST00000436669 444 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 COX7BP2-201ENST00000437976 242 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 ARL2BPP10-201ENST00000446487 531 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 EEF1A1P1-201ENST00000447052 739 ntBASIC6.13□□□□□ -1.43
SMC1BQ8NDV3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms