Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 DEFB130C-202ENST00000530001 230 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 RN7SL52P-201ENST00000584271 284 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AL512782.1-201ENST00000603093 364 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC009948.4-201ENST00000604692 675 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 RN7SL722P-201ENST00000617780 284 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 RN7SL565P-201ENST00000618246 284 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC139769.3-201ENST00000618383 175 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC109454.4-201ENST00000623411 649 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC015726.3-201ENST00000624501 418 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC073869.10-201ENST00000642016 354 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.54□□□□□ -1.68
BEST3Q8N1M1 AC099786.3-201ENST00000565735 1410 ntBASIC4.54□□□□□ -1.68
BEST3Q8N1M1 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 SCN1A-220ENST00000641603 12506 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 RNU4-51P-201ENST00000364206 140 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AL590139.1-201ENST00000416267 400 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AC019050.1-201ENST00000418508 492 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 OR6C64P-201ENST00000419708 825 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AP001324.1-201ENST00000428553 399 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 MTATP6P17-201ENST00000431030 672 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 MTCYBP42-201ENST00000444653 1130 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AL929288.2-201ENST00000446368 407 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 ZNF886P-201ENST00000450781 723 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AURKAPS2-201ENST00000454983 333 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 RPL23AP56-201ENST00000460778 453 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AL591473.1-201ENST00000464297 313 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AC091860.1-201ENST00000505723 432 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 HMGB3P16-201ENST00000508037 287 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 HIGD1AP5-201ENST00000529959 259 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AP001880.2-201ENST00000538233 448 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AL390334.1-201ENST00000556395 450 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 SULT1C2P2-201ENST00000562517 294 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 VN1R84P-201ENST00000593697 235 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AC234772.3-201ENST00000602277 528 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 BNIP3P4-201ENST00000604946 565 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AL391358.1-201ENST00000605342 190 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AC006946.3-201ENST00000609791 756 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 AC015871.5-202ENST00000623252 701 ntBASIC4.53□□□□□ -1.68
BEST3Q8N1M1 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.53□□□□□ -1.68
BEST3Q8N1M1 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.69
BEST3Q8N1M1 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
BEST3Q8N1M1 AC111188.2-201ENST00000529697 1387 ntBASIC4.53□□□□□ -1.69
BEST3Q8N1M1 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AC126323.6-202ENST00000568092 3511 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AL355578.1-201ENST00000607405 1328 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 AC006042.3-201ENST00000454684 1469 ntBASIC4.52□□□□□ -1.69
BEST3Q8N1M1 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
BEST3Q8N1M1 MIR192-201ENST00000384915 110 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms