Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
SCN4BQ8IWT1 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC099786.3-201ENST00000565735 1410 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC090017.1-201ENST00000548612 1779 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 MAPK10-338ENST00000641647 3362 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 RNA5SP187-201ENST00000384400 119 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 MIR92A2-201ENST00000385299 75 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 RN7SKP106-201ENST00000410832 272 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC069213.2-201ENST00000420238 366 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 LINC00993-201ENST00000420453 540 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 RPS26P47-201ENST00000427219 348 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 YWHAEP5-201ENST00000431545 765 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 MTND1P26-201ENST00000440488 538 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AL356981.1-201ENST00000454879 684 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 NDUFA12P1-201ENST00000455914 406 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 GYG1P1-201ENST00000460864 698 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 RPL12P20-201ENST00000475538 479 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 RPL5P22-201ENST00000480199 884 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC002456.2-201ENST00000509356 380 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 ENPP7P9-201ENST00000514456 627 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 FTH1P11-201ENST00000517577 551 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC093249.4-201ENST00000564755 259 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 RN7SL802P-201ENST00000577858 299 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 MIR5699-201ENST00000578903 90 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 ZNF92P3-201ENST00000596594 954 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC116447.1-201ENST00000613153 453 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 MIR6780A-201ENST00000615089 68 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC009159.2-201ENST00000617603 606 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 BX005214.3-202ENST00000619809 325 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC123767.1-202ENST00000620407 817 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 MIR7703-201ENST00000620784 77 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC015726.3-201ENST00000624501 418 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AL442639.1-201ENST00000625030 1899 ntBASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.06□□□□□ -1.6
SCN4BQ8IWT1 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AL137100.1-201ENST00000556703 1620 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AL355578.1-201ENST00000607405 1328 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 RNU6-98P-201ENST00000384173 107 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 BTF3P8-201ENST00000414577 526 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AC119751.6-201ENST00000416712 186 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AC092447.3-201ENST00000426027 686 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AL451139.1-201ENST00000434718 346 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AC016831.4-201ENST00000438302 307 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AL138878.2-201ENST00000440581 1241 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AC002542.1-201ENST00000440683 193 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AC010326.1-201ENST00000462726 602 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AC021660.1-201ENST00000465006 554 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AC068587.2-201ENST00000478386 781 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 RN7SL459P-201ENST00000481078 302 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AC073073.1-201ENST00000493920 463 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AC134050.1-201ENST00000495088 933 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 SCARNA22-201ENST00000503991 125 ntBASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.05□□□□□ -1.6
SCN4BQ8IWT1 RNU1-6P-201ENST00000516290 144 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms