Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 CR383656.6-201ENST00000550518 394 ntBASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AC090953.1-201ENST00000604305 1092 ntBASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AC010200.2-201ENST00000605098 235 ntBASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AC012603.1-201ENST00000606424 528 ntBASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 AP000346.3-201ENST00000622821 210 ntBASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 KPNA2P2-201ENST00000419546 1489 ntBASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
CDKL3Q8IVW4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 IGKV7-3-201ENST00000357453 298 ntBASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 SNORA56-201ENST00000383966 129 ntBASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 AL035696.2-201ENST00000407941 709 ntBASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 PGBD4P8-201ENST00000412993 562 ntBASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 NIPA2P1-201ENST00000426223 976 ntBASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 AC009963.2-201ENST00000453431 138 ntBASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 AF213884.1-201ENST00000488102 463 ntBASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 AC090281.1-201ENST00000523019 276 ntBASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 TVP23BP1-201ENST00000557500 617 ntBASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 AC026368.1-201ENST00000614934 690 ntBASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 AC004825.2-201ENST00000616634 455 ntBASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 AC022893.2-201ENST00000564832 3296 ntBASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDKL3Q8IVW4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 OR4K17-201ENST00000315543 1032 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 Y_RNA.62-201ENST00000362840 99 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 RNU4-7P-201ENST00000364758 141 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 RNU4-25P-201ENST00000410569 230 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 AC011933.1-201ENST00000413334 321 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 JKAMPP1-201ENST00000413804 919 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 BTG3P1-201ENST00000435859 716 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 CBX1P1-201ENST00000440184 427 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 AL645939.1-201ENST00000453429 797 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 AC116533.1-201ENST00000459748 321 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 AC109327.1-201ENST00000471666 403 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 RN7SL205P-201ENST00000490174 284 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 HIGD1AP5-201ENST00000529959 259 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 AC022655.2-201ENST00000577280 318 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 AC078899.5-201ENST00000612475 178 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 RN7SL722P-201ENST00000617780 284 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 RN7SL565P-201ENST00000618246 284 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 AC093311.1-201ENST00000506586 2021 ntBASIC4.27□□□□□ -1.73
CDKL3Q8IVW4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms