Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 MTCO1P46-201ENST00000451639 1491 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 VPS35P1-201ENST00000563400 1518 ntBASIC2.72□□□□□ -1.97
CSMD3Q7Z407 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CSMD3Q7Z407 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC2.71□□□□□ -1.97
CSMD3Q7Z407 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC2.71□□□□□ -1.97
CSMD3Q7Z407 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC2.71□□□□□ -1.97
CSMD3Q7Z407 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC2.71□□□□□ -1.97
CSMD3Q7Z407 XGY1-201ENST00000381172 446 ntBASIC2.71□□□□□ -1.97
CSMD3Q7Z407 SNORD96B-201ENST00000386148 79 ntBASIC2.71□□□□□ -1.97
CSMD3Q7Z407 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC2.71□□□□□ -1.97
CSMD3Q7Z407 VN1R32P-201ENST00000452234 905 ntBASIC2.71□□□□□ -1.97
CSMD3Q7Z407 RPL21P10-201ENST00000463521 490 ntBASIC2.71□□□□□ -1.97
CSMD3Q7Z407 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.71□□□□□ -1.97
CSMD3Q7Z407 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.71□□□□□ -1.97
CSMD3Q7Z407 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC2.71□□□□□ -1.97
CSMD3Q7Z407 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC2.71□□□□□ -1.97
CSMD3Q7Z407 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.71□□□□□ -1.97
CSMD3Q7Z407 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC2.71□□□□□ -1.97
CSMD3Q7Z407 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.71□□□□□ -1.97
CSMD3Q7Z407 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
CSMD3Q7Z407 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.97
CSMD3Q7Z407 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 AC097634.1-201ENST00000604491 2467 ntBASIC2.71□□□□□ -1.98
CSMD3Q7Z407 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 AL035423.1-201ENST00000420331 213 ntBASIC2.71□□□□□ -1.98
CSMD3Q7Z407 AC009506.2-201ENST00000420635 840 ntBASIC2.71□□□□□ -1.98
CSMD3Q7Z407 RPS26P4-201ENST00000431743 355 ntBASIC2.71□□□□□ -1.98
CSMD3Q7Z407 RPS27AP1-201ENST00000475545 471 ntBASIC2.71□□□□□ -1.98
CSMD3Q7Z407 RPL21P13-201ENST00000488305 481 ntBASIC2.71□□□□□ -1.98
CSMD3Q7Z407 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 AL031666.3-201ENST00000609320 1006 ntBASIC2.71□□□□□ -1.98
CSMD3Q7Z407 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 SUPT16HP1-201ENST00000537175 3133 ntBASIC2.71□□□□□ -1.98
CSMD3Q7Z407 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 SNORA60-201ENST00000362396 134 ntBASIC2.71□□□□□ -1.98
CSMD3Q7Z407 RNA5SP97-201ENST00000365006 84 ntBASIC2.71□□□□□ -1.98
CSMD3Q7Z407 RN7SKP186-201ENST00000365371 303 ntBASIC2.71□□□□□ -1.98
CSMD3Q7Z407 RNA5SP306-201ENST00000411087 107 ntBASIC2.71□□□□□ -1.98
CSMD3Q7Z407 AC025750.2-201ENST00000442609 450 ntBASIC2.71□□□□□ -1.98
CSMD3Q7Z407 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
CSMD3Q7Z407 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 MAPK10-320ENST00000641462 6696 ntBASIC2.7□□□□□ -1.98
CSMD3Q7Z407 IL6STP1-201ENST00000346911 1020 ntBASIC2.7□□□□□ -1.98
CSMD3Q7Z407 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AC006960.3-201ENST00000561845 705 ntBASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AP005264.7-201ENST00000625003 745 ntBASIC2.7□□□□□ -1.98
CSMD3Q7Z407 GVINP1-202ENST00000531871 7271 ntBASIC2.7□□□□□ -1.98
CSMD3Q7Z407 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AP004289.2-201ENST00000444413 1457 ntBASIC2.7□□□□□ -1.98
CSMD3Q7Z407 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AL445433.1-201ENST00000457507 257 ntBASIC2.7□□□□□ -1.98
CSMD3Q7Z407 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 FTH1P24-201ENST00000503502 462 ntBASIC2.7□□□□□ -1.98
CSMD3Q7Z407 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.7□□□□□ -1.98
CSMD3Q7Z407 SCARNA15.3-201ENST00000626315 122 ntBASIC2.7□□□□□ -1.98
CSMD3Q7Z407 SCARNA4.1-201ENST00000628597 123 ntBASIC2.7□□□□□ -1.98
CSMD3Q7Z407 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms