Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.48□□□□□ -1.69
SHFQ7M4L6 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.48□□□□□ -1.69
SHFQ7M4L6 AL049779.2-201ENST00000553847 315 ntBASIC4.48□□□□□ -1.69
SHFQ7M4L6 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SHFQ7M4L6 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.48□□□□□ -1.69
SHFQ7M4L6 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.48□□□□□ -1.69
SHFQ7M4L6 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.48□□□□□ -1.69
SHFQ7M4L6 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
SHFQ7M4L6 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.48□□□□□ -1.69
SHFQ7M4L6 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.48□□□□□ -1.69
SHFQ7M4L6 AC068790.7-201ENST00000602347 528 ntBASIC4.48□□□□□ -1.69
SHFQ7M4L6 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.48□□□□□ -1.69
SHFQ7M4L6 AC021749.1-201ENST00000604322 607 ntBASIC4.48□□□□□ -1.69
SHFQ7M4L6 AC099676.1-201ENST00000608886 657 ntBASIC4.48□□□□□ -1.69
SHFQ7M4L6 AC007204.2-201ENST00000615022 616 ntBASIC4.48□□□□□ -1.69
SHFQ7M4L6 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.48□□□□□ -1.69
SHFQ7M4L6 AC087821.2-201ENST00000637086 450 ntBASIC4.48□□□□□ -1.69
SHFQ7M4L6 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHFQ7M4L6 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHFQ7M4L6 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHFQ7M4L6 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.48□□□□□ -1.69
SHFQ7M4L6 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHFQ7M4L6 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SHFQ7M4L6 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SHFQ7M4L6 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
SHFQ7M4L6 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
SHFQ7M4L6 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHFQ7M4L6 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.48□□□□□ -1.69
SHFQ7M4L6 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHFQ7M4L6 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHFQ7M4L6 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHFQ7M4L6 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHFQ7M4L6 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHFQ7M4L6 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHFQ7M4L6 NACA3P-201ENST00000359690 648 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 SNORA17A-201ENST00000391185 133 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 SNORA77-201ENST00000408716 125 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 TMBIM7P-201ENST00000418074 855 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 AC108075.1-201ENST00000424692 529 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 CKS1BP6-201ENST00000424932 240 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 AC092809.1-201ENST00000441469 474 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 RPS7P5-201ENST00000441482 581 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 SPRYD7P1-201ENST00000443861 570 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 RN7SL717P-201ENST00000478343 297 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 MTND2P14-201ENST00000482139 351 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHFQ7M4L6 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 MTATP6P1-201ENST00000514057 681 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 BX510359.5-201ENST00000515651 304 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 AC134698.5-201ENST00000519444 336 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 AC012339.2-201ENST00000523996 453 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHFQ7M4L6 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 AADACP1-206ENST00000561502 1193 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 RN7SL176P-201ENST00000580352 264 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 AC095055.1-201ENST00000603472 1113 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 TAS2R6P-201ENST00000605022 826 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 AP003392.5-201ENST00000607857 415 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 SNORD91B-202ENST00000608459 222 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 AP000255.1-201ENST00000610276 676 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 AC109309.2-201ENST00000612597 332 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 SNORA17.5-201ENST00000630429 132 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 LINC01109-201ENST00000603837 3081 ntBASIC4.47□□□□□ -1.69
SHFQ7M4L6 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SHFQ7M4L6 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SHFQ7M4L6 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.47□□□□□ -1.69
SHFQ7M4L6 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SHFQ7M4L6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SHFQ7M4L6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.46□□□□□ -1.69
SHFQ7M4L6 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHFQ7M4L6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHFQ7M4L6 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SHFQ7M4L6 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 AP005901.5-201ENST00000545779 1796 ntBASIC4.46□□□□□ -1.7
SHFQ7M4L6 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.46□□□□□ -1.7
SHFQ7M4L6 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms