Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS13CQ709C8 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS13CQ709C8 AC092435.3-201ENST00000565538 3654 ntBASIC3.13□□□□□ -1.91
VPS13CQ709C8 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS13CQ709C8 AL590609.2-201ENST00000421430 368 ntBASIC3.13□□□□□ -1.91
VPS13CQ709C8 AL160175.1-201ENST00000428124 247 ntBASIC3.13□□□□□ -1.91
VPS13CQ709C8 AC087650.1-201ENST00000431445 468 ntBASIC3.13□□□□□ -1.91
VPS13CQ709C8 RPL26P28-201ENST00000451325 435 ntBASIC3.13□□□□□ -1.91
VPS13CQ709C8 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS13CQ709C8 HMGB1P21-201ENST00000502313 581 ntBASIC3.13□□□□□ -1.91
VPS13CQ709C8 TUG1_1.1-201ENST00000610654 145 ntBASIC3.13□□□□□ -1.91
VPS13CQ709C8 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS13CQ709C8 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS13CQ709C8 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS13CQ709C8 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS13CQ709C8 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
VPS13CQ709C8 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS13CQ709C8 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
VPS13CQ709C8 OSTCP5-201ENST00000425293 453 ntBASIC3.13□□□□□ -1.91
VPS13CQ709C8 ATP5JP1-201ENST00000431631 322 ntBASIC3.13□□□□□ -1.91
VPS13CQ709C8 FABP3P2-201ENST00000453169 399 ntBASIC3.13□□□□□ -1.91
VPS13CQ709C8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS13CQ709C8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.13□□□□□ -1.91
VPS13CQ709C8 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.13□□□□□ -1.91
VPS13CQ709C8 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC3.13□□□□□ -1.91
VPS13CQ709C8 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
VPS13CQ709C8 AC139426.3-201ENST00000605648 2059 ntBASIC3.13□□□□□ -1.91
VPS13CQ709C8 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
VPS13CQ709C8 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
VPS13CQ709C8 RNA5SP175-201ENST00000364275 119 ntBASIC3.12□□□□□ -1.91
VPS13CQ709C8 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.12□□□□□ -1.91
VPS13CQ709C8 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS13CQ709C8 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS13CQ709C8 AC073387.1-201ENST00000453261 709 ntBASIC3.12□□□□□ -1.91
VPS13CQ709C8 RN7SL807P-201ENST00000470923 297 ntBASIC3.12□□□□□ -1.91
VPS13CQ709C8 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS13CQ709C8 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.12□□□□□ -1.91
VPS13CQ709C8 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS13CQ709C8 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
VPS13CQ709C8 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 RNU1-44P-201ENST00000384453 163 ntBASIC3.12□□□□□ -1.91
VPS13CQ709C8 RPS4XP12-201ENST00000461747 709 ntBASIC3.12□□□□□ -1.91
VPS13CQ709C8 MIR5004-201ENST00000579078 107 ntBASIC3.12□□□□□ -1.91
VPS13CQ709C8 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC3.12□□□□□ -1.91
VPS13CQ709C8 AC104662.1-201ENST00000604448 511 ntBASIC3.12□□□□□ -1.91
VPS13CQ709C8 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
VPS13CQ709C8 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS13CQ709C8 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.12□□□□□ -1.91
VPS13CQ709C8 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.12□□□□□ -1.91
VPS13CQ709C8 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
VPS13CQ709C8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VPS13CQ709C8 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS13CQ709C8 COX6CP4-201ENST00000605798 228 ntBASIC3.11□□□□□ -1.91
VPS13CQ709C8 AC110801.1-201ENST00000623590 212 ntBASIC3.11□□□□□ -1.91
VPS13CQ709C8 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS13CQ709C8 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
VPS13CQ709C8 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
VPS13CQ709C8 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS13CQ709C8 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
VPS13CQ709C8 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS13CQ709C8 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS13CQ709C8 HMGB3P16-201ENST00000508037 287 ntBASIC3.11□□□□□ -1.91
VPS13CQ709C8 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS13CQ709C8 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS13CQ709C8 AC022968.1-201ENST00000567372 442 ntBASIC3.11□□□□□ -1.91
VPS13CQ709C8 AL355365.1-201ENST00000616480 294 ntBASIC3.11□□□□□ -1.91
VPS13CQ709C8 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS13CQ709C8 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VPS13CQ709C8 AP000432.2-201ENST00000624164 2048 ntBASIC3.11□□□□□ -1.91
VPS13CQ709C8 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
VPS13CQ709C8 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
VPS13CQ709C8 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
VPS13CQ709C8 AL365440.1-201ENST00000436135 2167 ntBASIC3.11□□□□□ -1.91
VPS13CQ709C8 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.11□□□□□ -1.91
VPS13CQ709C8 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
VPS13CQ709C8 BMS1P3-201ENST00000372011 932 ntBASIC3.11□□□□□ -1.91
VPS13CQ709C8 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.11□□□□□ -1.91
VPS13CQ709C8 OR8I1P-201ENST00000529291 931 ntBASIC3.11□□□□□ -1.91
VPS13CQ709C8 MIR4433B-201ENST00000581329 102 ntBASIC3.11□□□□□ -1.91
VPS13CQ709C8 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.11□□□□□ -1.91
VPS13CQ709C8 AC006116.10-201ENST00000591836 581 ntBASIC3.11□□□□□ -1.91
VPS13CQ709C8 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms