Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 AC087477.6-201ENST00000559595 843 ntBASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 NCLP2-201ENST00000416078 1462 ntBASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 AC090229.1-201ENST00000590983 1609 ntBASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.28□□□□□ -1.72
NHLRC1Q6VVB1 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 ZNF849P-201ENST00000594711 1566 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 ZFRP1-201ENST00000457579 2970 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 IL6STP1-201ENST00000346911 1020 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 RNU6-468P-201ENST00000384003 109 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 HMGB3P19-201ENST00000403971 560 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 AP000580.1-201ENST00000404439 358 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 AL445183.3-201ENST00000414168 502 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 MTCO2P1-201ENST00000424648 477 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 AC008065.1-201ENST00000428525 348 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 AC004938.1-201ENST00000438468 308 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 TDGF1P1-201ENST00000445734 527 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 SLC25A18P1-201ENST00000449385 454 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 AL162388.1-201ENST00000450912 352 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 DNAJC19P8-201ENST00000452887 259 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 AC092905.1-201ENST00000467527 949 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 RN7SL329P-201ENST00000467740 299 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 DEFB109F-201ENST00000491870 277 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 AC147055.3-201ENST00000510547 851 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 OR5H4P-201ENST00000510851 923 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 AC021146.3-201ENST00000511911 260 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 TCP11X3P-202ENST00000514289 1254 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 AC008494.2-201ENST00000514544 370 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 BGLT3-201ENST00000564523 994 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 RN7SL176P-201ENST00000580352 264 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 AC011487.3-201ENST00000593607 453 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 AC087283.1-201ENST00000604029 1074 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 ERCC6-202ENST00000374127 1782 ntBASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.27□□□□□ -1.73
NHLRC1Q6VVB1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 RNU6-354P-201ENST00000383862 107 ntBASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 RNU6-610P-201ENST00000384264 107 ntBASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 AL590762.2-201ENST00000395798 571 ntBASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 AL355615.1-201ENST00000406187 641 ntBASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 YWHAEP5-201ENST00000431545 765 ntBASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 NMNAT1P2-201ENST00000435192 860 ntBASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 VN1R54P-201ENST00000435210 1049 ntBASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 AL592437.1-201ENST00000443781 492 ntBASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 AC233982.1-201ENST00000451247 436 ntBASIC4.26□□□□□ -1.73
NHLRC1Q6VVB1 AC234781.3-201ENST00000452540 973 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms