Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF43Q68DV7 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
RNF43Q68DV7 AL049634.1-201ENST00000453770 1720 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF43Q68DV7 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RNF43Q68DV7 RNA5SP478-201ENST00000364657 115 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 RNA5SP88-201ENST00000365560 109 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.37□□□□□ -1.39
RNF43Q68DV7 MIR130B-202ENST00000385018 82 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 SNORA75.4-201ENST00000391278 119 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
RNF43Q68DV7 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RNF43Q68DV7 RNU4-55P-201ENST00000410731 137 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 LINC01347-201ENST00000417964 355 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 AC015977.1-201ENST00000418887 292 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 ZNF90P2-204ENST00000419323 1075 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 NENFP1-201ENST00000419476 466 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 AL590399.2-201ENST00000427536 309 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 SAR1AP4-201ENST00000429225 591 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 AC018644.1-201ENST00000429934 551 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 MTCO1P54-201ENST00000430139 712 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 TAAR7P-201ENST00000436141 242 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 TUBB4BP6-201ENST00000437576 479 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 MTND3P2-201ENST00000438452 342 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC6.37□□□□□ -1.39
RNF43Q68DV7 AC097499.1-201ENST00000444277 208 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.37□□□□□ -1.39
RNF43Q68DV7 AC002553.3-201ENST00000453002 341 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 RANP2-201ENST00000456833 229 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 RN7SL717P-201ENST00000478343 297 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 RN7SL273P-201ENST00000481561 299 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC6.37□□□□□ -1.39
RNF43Q68DV7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC6.37□□□□□ -1.39
RNF43Q68DV7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
RNF43Q68DV7 SAP18P1-201ENST00000512058 390 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.37□□□□□ -1.39
RNF43Q68DV7 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RNF43Q68DV7 OR6M2P-201ENST00000529831 871 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 AC027544.3-201ENST00000535082 757 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 NACA-211ENST00000548563 827 ntTSL 5 BASIC6.37□□□□□ -1.39
RNF43Q68DV7 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.37□□□□□ -1.39
RNF43Q68DV7 AL359212.1-201ENST00000556608 614 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RNF43Q68DV7 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.37□□□□□ -1.39
RNF43Q68DV7 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.37□□□□□ -1.39
RNF43Q68DV7 AC137800.2-201ENST00000574375 120 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.37□□□□□ -1.39
RNF43Q68DV7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.37□□□□□ -1.39
RNF43Q68DV7 AC091488.1-201ENST00000604239 660 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RNF43Q68DV7 AC103710.1-201ENST00000610003 901 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 AL512652.1-201ENST00000619006 500 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 AL713922.2-201ENST00000619384 716 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 AP003400.3-201ENST00000624904 346 ntBASIC6.37□□□□□ -1.39
RNF43Q68DV7 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF43Q68DV7 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF43Q68DV7 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.37□□□□□ -1.39
RNF43Q68DV7 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RNF43Q68DV7 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RNF43Q68DV7 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RNF43Q68DV7 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RNF43Q68DV7 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RNF43Q68DV7 AC092162.3-201ENST00000624511 1624 ntBASIC6.36□□□□□ -1.39
RNF43Q68DV7 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RNF43Q68DV7 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RNF43Q68DV7 Y_RNA.86-201ENST00000363020 111 ntBASIC6.36□□□□□ -1.39
RNF43Q68DV7 SNORA43.1-201ENST00000364863 140 ntBASIC6.36□□□□□ -1.39
RNF43Q68DV7 RNU5E-5P-201ENST00000365379 116 ntBASIC6.36□□□□□ -1.39
RNF43Q68DV7 Y_RNA.409-201ENST00000383990 98 ntBASIC6.36□□□□□ -1.39
RNF43Q68DV7 RNU6-483P-201ENST00000384088 108 ntBASIC6.36□□□□□ -1.39
RNF43Q68DV7 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 AMD1P2-201ENST00000412936 992 ntBASIC6.36□□□□□ -1.39
RNF43Q68DV7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 UBE2V1P14-201ENST00000415815 558 ntBASIC6.36□□□□□ -1.39
RNF43Q68DV7 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 GAPDHP23-201ENST00000444823 993 ntBASIC6.36□□□□□ -1.39
RNF43Q68DV7 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 ST13P14-201ENST00000474095 734 ntBASIC6.36□□□□□ -1.39
RNF43Q68DV7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 RNU6-1225P-201ENST00000516336 65 ntBASIC6.36□□□□□ -1.39
RNF43Q68DV7 RN7SKP238-201ENST00000516483 249 ntBASIC6.36□□□□□ -1.39
RNF43Q68DV7 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 OR6C73P-201ENST00000546432 358 ntBASIC6.36□□□□□ -1.39
RNF43Q68DV7 AC137768.1-201ENST00000549998 553 ntBASIC6.36□□□□□ -1.39
RNF43Q68DV7 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 AC007225.2-201ENST00000562529 256 ntBASIC6.36□□□□□ -1.39
RNF43Q68DV7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 MRO-208ENST00000588444 866 ntTSL 3 BASIC6.36□□□□□ -1.39
RNF43Q68DV7 AC020914.6-201ENST00000594327 272 ntBASIC6.36□□□□□ -1.39
RNF43Q68DV7 AC087283.1-201ENST00000604029 1074 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms