Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 NTAN1P1-201ENST00000603150 646 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AC098935.2-201ENST00000604222 466 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 MIR6748-201ENST00000610433 71 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 uc_338.18-201ENST00000615451 175 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 MIR6853-201ENST00000619642 74 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AL391262.2-201ENST00000622466 494 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 AC017104.5-201ENST00000637647 639 ntBASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SNX30Q5VWJ9 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 NSRP1P1-201ENST00000444067 1693 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 AL592182.3-201ENST00000642132 3304 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 RNU6-932P-201ENST00000391108 106 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 HSFY7P-201ENST00000432672 318 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 AC011242.1-201ENST00000433596 1158 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 HSFY8P-201ENST00000437934 318 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 Z95152.1-201ENST00000453556 656 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 HSFY5P-201ENST00000453726 309 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 RNA5SP249-201ENST00000516127 99 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 RNU1-6P-201ENST00000516290 144 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 AC104115.2-201ENST00000523026 687 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 MIR4789-201ENST00000577469 82 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 MIR4330-201ENST00000579077 105 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 RN7SL52P-201ENST00000584271 284 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 AC008507.2-201ENST00000588402 1176 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 AC097504.2-201ENST00000608088 454 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 RNU6-1192P-201ENST00000612197 107 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 AC009318.3-201ENST00000616916 503 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 RNU6-489P-201ENST00000618289 107 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 AL121890.3-201ENST00000618494 516 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 MAPK10-263ENST00000641052 4307 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 MTCO1P6-201ENST00000481192 1384 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 AL353743.4-201ENST00000422653 1547 ntBASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SNX30Q5VWJ9 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 AC093535.2-201ENST00000624769 2326 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 AC114546.3-201ENST00000623582 1734 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 AC104118.1-201ENST00000607625 1589 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 AL049737.1-201ENST00000413920 1403 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 SNORA56-201ENST00000383966 129 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 SNORA51.12-201ENST00000384448 134 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 MIR620-201ENST00000385232 95 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 RPS16P5-201ENST00000406501 404 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 AL512430.2-201ENST00000406786 339 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 RPL31P52-201ENST00000407532 367 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 E2F6P2-201ENST00000420708 748 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 FO393414.1-201ENST00000428697 1184 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 RPL12P28-201ENST00000430852 489 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 AL451139.1-201ENST00000434718 346 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 RPS7P2-201ENST00000435134 607 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 FABP5P3-201ENST00000437960 408 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 AC016831.4-201ENST00000438302 307 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 AC009263.1-201ENST00000441193 1239 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 GXYLT1P1-201ENST00000446657 490 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 EEF1A1P1-201ENST00000447052 739 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 ATP5G1P3-201ENST00000463301 410 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 RPL21P18-201ENST00000469899 480 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 AC010374.1-201ENST00000503762 1237 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 RNU6-709P-201ENST00000517257 104 ntBASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.01□□□□□ -1.61
SNX30Q5VWJ9 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms