Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 RN7SL826P-201ENST00000479724 288 ntBASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 AC108734.3-201ENST00000481241 1165 ntBASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 LINC00888-204ENST00000487386 421 ntBASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 AC104090.1-201ENST00000506341 1171 ntBASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 XKRY-201ENST00000510392 1100 ntBASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 AC006427.1-201ENST00000514359 712 ntBASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 RNA5SP230-201ENST00000517039 122 ntBASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 AC105185.1-201ENST00000518705 535 ntBASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 AC084824.1-201ENST00000550917 1005 ntBASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 AC090751.1-201ENST00000566966 267 ntBASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 AC022884.2-201ENST00000578535 580 ntBASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 VN1R82P-201ENST00000601481 356 ntBASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 AL031281.1-201ENST00000604049 488 ntBASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 AC106791.2-201ENST00000604680 391 ntBASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 AL451074.6-201ENST00000608512 729 ntBASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 MIR6730-201ENST00000622213 67 ntBASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
PTCHD3Q3KNS1 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.6
PTCHD3Q3KNS1 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.09□□□□□ -1.6
PTCHD3Q3KNS1 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC006210.2-201ENST00000367074 1545 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 THAP12P5-201ENST00000405864 2275 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC096656.1-201ENST00000623826 1364 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AL606537.1-201ENST00000607258 2011 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 RNA5SP223-201ENST00000365174 120 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 RNU1-106P-201ENST00000384382 164 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 SNORD65.1-201ENST00000390889 71 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 OR8V1P-201ENST00000395193 873 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AL645927.1-201ENST00000396783 406 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 TMSB4XP8-201ENST00000402089 135 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 TMSB4XP6-201ENST00000415187 135 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC004074.1-201ENST00000421810 1063 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AL139421.1-201ENST00000423010 169 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 TMSB4XP1-201ENST00000424567 135 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 RPL7P44-201ENST00000424827 742 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 RPL7P4-203ENST00000430239 730 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 MTCO3P5-201ENST00000433620 714 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AL161722.2-201ENST00000434731 981 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 CBX1P4-201ENST00000439415 457 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 RFC5P1-201ENST00000454419 874 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 HMGB1P4-201ENST00000455362 567 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 MTND2P28-201ENST00000457540 1044 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 RPL7AP52-201ENST00000458096 790 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 RPL23AP71-201ENST00000470966 469 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC004453.1-201ENST00000487895 408 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 DYNLL1P6-201ENST00000503440 264 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 IGBP1P5-201ENST00000507524 1000 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 MTCYBP16-201ENST00000509187 1129 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC079395.1-201ENST00000510981 262 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 HMGB1P23-201ENST00000518743 568 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 COX6B1P6-201ENST00000522347 255 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC022832.1-201ENST00000530718 645 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC005832.3-201ENST00000537929 631 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AL358913.1-201ENST00000554342 121 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC090616.2-202ENST00000584248 222 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 MIR4999-201ENST00000585029 91 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC096553.1-201ENST00000605169 829 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AP004247.3-201ENST00000608682 624 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AL354976.1-201ENST00000613843 387 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC090510.2-201ENST00000617465 629 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC118658.2-201ENST00000618697 459 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC018926.3-201ENST00000618841 406 ntBASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC5.08□□□□□ -1.6
PTCHD3Q3KNS1 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms