Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 AC010329.2-201ENST00000595195 2737 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HMGCS1Q01581 NOL8P1-201ENST00000508336 3529 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 AL445437.1-201ENST00000623157 3087 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 AC110792.3-201ENST00000595906 1614 ntBASIC4.02□□□□□ -1.77
HMGCS1Q01581 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HMGCS1Q01581 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGCS1Q01581 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HMGCS1Q01581 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 RNA5SP509-201ENST00000364577 119 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 MIR141-201ENST00000384975 95 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 P2RY10P2-201ENST00000416730 913 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 AL592293.2-201ENST00000422292 996 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 AC069285.2-201ENST00000440210 275 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 AC009220.1-201ENST00000451614 275 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 CLIC4P1-201ENST00000453177 535 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 AL354710.1-201ENST00000453641 246 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 C1DP3-201ENST00000455013 423 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 AC109327.1-201ENST00000471666 403 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 HMGB3P14-201ENST00000494195 599 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 HMGB3P13-201ENST00000511263 607 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 AC093840.1-201ENST00000511599 336 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HMGCS1Q01581 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 MYL12AP1-201ENST00000518490 515 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 AC068446.3-201ENST00000555285 382 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 AC007599.1-201ENST00000568688 1174 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HMGCS1Q01581 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 AF230666.2-201ENST00000602328 725 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 BNIP3P7-201ENST00000605641 516 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 AL023583.1-201ENST00000607518 1143 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 AL023881.1-201ENST00000621088 301 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGCS1Q01581 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
HMGCS1Q01581 AC018529.3-201ENST00000624212 2254 ntBASIC4.01□□□□□ -1.77
HMGCS1Q01581 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
HMGCS1Q01581 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
HMGCS1Q01581 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HMGCS1Q01581 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4□□□□□ -1.77
HMGCS1Q01581 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4□□□□□ -1.77
HMGCS1Q01581 AC092079.1-201ENST00000558620 1985 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4□□□□□ -1.77
HMGCS1Q01581 AC092162.3-201ENST00000624511 1624 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
HMGCS1Q01581 AC009313.2-201ENST00000417893 1941 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 OR4K17-201ENST00000315543 1032 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4□□□□□ -1.77
HMGCS1Q01581 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4□□□□□ -1.77
HMGCS1Q01581 MIR708-201ENST00000390708 88 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4□□□□□ -1.77
HMGCS1Q01581 AL158073.1-201ENST00000426848 1104 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 AC016712.1-201ENST00000431088 378 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 RPS20P1-201ENST00000434853 354 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 CBX1P1-201ENST00000440184 427 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 AL353748.1-201ENST00000440753 474 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4□□□□□ -1.77
HMGCS1Q01581 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4□□□□□ -1.77
HMGCS1Q01581 AL162388.1-201ENST00000450912 352 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4□□□□□ -1.77
HMGCS1Q01581 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4□□□□□ -1.77
HMGCS1Q01581 RPL35P6-201ENST00000490024 372 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 OR51K1P-201ENST00000510214 950 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 AC008958.1-201ENST00000511047 682 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4□□□□□ -1.77
HMGCS1Q01581 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
HMGCS1Q01581 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4□□□□□ -1.77
HMGCS1Q01581 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4□□□□□ -1.77
HMGCS1Q01581 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4□□□□□ -1.77
HMGCS1Q01581 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4□□□□□ -1.77
HMGCS1Q01581 AL139395.1-201ENST00000603662 160 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4□□□□□ -1.77
HMGCS1Q01581 FAM27D1-201ENST00000612308 341 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 AC105105.5-201ENST00000622635 1294 ntBASIC4□□□□□ -1.77
HMGCS1Q01581 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms