Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.44□□□□□ -1.7
SEC61A1P61619 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
SEC61A1P61619 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.44□□□□□ -1.7
SEC61A1P61619 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.44□□□□□ -1.7
SEC61A1P61619 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SEC61A1P61619 SNORD113-6-201ENST00000363345 75 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
SEC61A1P61619 RNU4-31P-201ENST00000384211 141 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 SNORA70-201ENST00000384436 135 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 MIR105-1-201ENST00000385222 81 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 RNA5SP498-201ENST00000411342 120 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 MTND4P22-201ENST00000413116 1169 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 MFSD13B-201ENST00000420133 1290 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 AL358176.3-201ENST00000420757 454 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.44□□□□□ -1.7
SEC61A1P61619 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.44□□□□□ -1.7
SEC61A1P61619 FTH1P16-201ENST00000435241 552 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.44□□□□□ -1.7
SEC61A1P61619 GAPDHP25-201ENST00000447061 1001 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SEC61A1P61619 AC233982.1-201ENST00000451247 436 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 MRPL35P4-201ENST00000453682 566 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.44□□□□□ -1.7
SEC61A1P61619 SEPT7P3-201ENST00000455017 621 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 AL445433.1-201ENST00000457507 257 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 RPL7P6-201ENST00000480903 738 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 AC069528.1-202ENST00000482888 637 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 RPL7P41-201ENST00000485823 957 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.44□□□□□ -1.7
SEC61A1P61619 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.44□□□□□ -1.7
SEC61A1P61619 RNU5A-4P-201ENST00000516588 111 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 RNA5SP373-201ENST00000517271 95 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.44□□□□□ -1.7
SEC61A1P61619 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.44□□□□□ -1.7
SEC61A1P61619 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SEC61A1P61619 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.44□□□□□ -1.7
SEC61A1P61619 MTCO3P15-201ENST00000526563 574 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.44□□□□□ -1.7
SEC61A1P61619 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.44□□□□□ -1.7
SEC61A1P61619 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SEC61A1P61619 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.44□□□□□ -1.7
SEC61A1P61619 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.44□□□□□ -1.7
SEC61A1P61619 RN7SL52P-201ENST00000584271 284 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.44□□□□□ -1.7
SEC61A1P61619 RNF138P2-201ENST00000603490 592 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.44□□□□□ -1.7
SEC61A1P61619 BX323046.1-201ENST00000610145 535 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 VIS1.1-201ENST00000610517 203 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.44□□□□□ -1.7
SEC61A1P61619 AP003497.2-201ENST00000624220 967 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 AC092608.3-201ENST00000625017 386 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 AC074101.1-201ENST00000637861 241 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 MIR1322-201ENST00000638013 71 ntBASIC4.44□□□□□ -1.7
SEC61A1P61619 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SEC61A1P61619 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SEC61A1P61619 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
SEC61A1P61619 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
SEC61A1P61619 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SEC61A1P61619 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SEC61A1P61619 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SEC61A1P61619 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SEC61A1P61619 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.44□□□□□ -1.7
SEC61A1P61619 CASC19-284ENST00000642142 1868 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SEC61A1P61619 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SEC61A1P61619 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SEC61A1P61619 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SEC61A1P61619 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.43□□□□□ -1.7
SEC61A1P61619 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SEC61A1P61619 VPS35P1-201ENST00000563400 1518 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SEC61A1P61619 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SEC61A1P61619 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SEC61A1P61619 METTL21EP-201ENST00000298105 713 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 U8.4-201ENST00000363626 134 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 SNORA58B-201ENST00000364259 136 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 SNORA62.2-201ENST00000364672 152 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 RNA5SP223-201ENST00000365174 120 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SEC61A1P61619 Y_RNA.436-201ENST00000384097 102 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 RNU4-72P-201ENST00000410754 173 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.43□□□□□ -1.7
SEC61A1P61619 AC007394.1-201ENST00000421941 531 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.43□□□□□ -1.7
SEC61A1P61619 RPP40P1-201ENST00000426762 456 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 NPM1P22-201ENST00000427761 952 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 YWHAEP5-201ENST00000431545 765 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 AC005345.1-201ENST00000431868 217 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.43□□□□□ -1.7
SEC61A1P61619 AL161722.2-201ENST00000434731 981 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 AC073143.1-201ENST00000436316 395 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 UBE2D3P1-201ENST00000436669 444 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.43□□□□□ -1.7
SEC61A1P61619 AL445567.1-201ENST00000439121 144 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 AC092170.1-201ENST00000440211 356 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 UBE2D3P4-201ENST00000441973 436 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 AL592437.1-201ENST00000443781 492 ntBASIC4.43□□□□□ -1.7
SEC61A1P61619 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms