Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.06□□□□□ -1.92
CKS1BP61024 RPL7P11-201ENST00000437586 658 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.06□□□□□ -1.92
CKS1BP61024 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC3.06□□□□□ -1.92
CKS1BP61024 RPL23AP43-201ENST00000446445 471 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 AL935212.3-201ENST00000450729 284 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 AC092905.1-201ENST00000467527 949 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 AC104763.1-201ENST00000475274 360 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 UBTFL6-201ENST00000477929 1024 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 AC090114.3-201ENST00000479267 829 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 AC069499.1-201ENST00000489433 509 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 IGLV2-34-201ENST00000490007 283 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CKS1BP61024 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.06□□□□□ -1.92
CKS1BP61024 MRPS33P2-201ENST00000507850 322 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CKS1BP61024 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC3.06□□□□□ -1.92
CKS1BP61024 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC3.06□□□□□ -1.92
CKS1BP61024 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CKS1BP61024 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.06□□□□□ -1.92
CKS1BP61024 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.06□□□□□ -1.92
CKS1BP61024 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.06□□□□□ -1.92
CKS1BP61024 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.06□□□□□ -1.92
CKS1BP61024 AC007225.2-201ENST00000562529 256 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC3.06□□□□□ -1.92
CKS1BP61024 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.06□□□□□ -1.92
CKS1BP61024 NXPH1-205ENST00000602349 1953 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 AP003117.2-201ENST00000606010 545 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 AC099778.2-201ENST00000610904 211 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.06□□□□□ -1.92
CKS1BP61024 PLCE1P1-201ENST00000622094 305 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 AC091905.4-201ENST00000623432 202 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 AP003072.4-201ENST00000624580 310 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 SNORA50A-202ENST00000629536 136 ntBASIC3.06□□□□□ -1.92
CKS1BP61024 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CKS1BP61024 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CKS1BP61024 AL672296.1-201ENST00000427780 2158 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CKS1BP61024 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CKS1BP61024 PABPC1P6-201ENST00000445594 1829 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.05□□□□□ -1.92
CKS1BP61024 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CKS1BP61024 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
CKS1BP61024 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CKS1BP61024 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CKS1BP61024 RNU1-15P-201ENST00000353977 144 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 SNORA31-201ENST00000362607 130 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 MIR591-201ENST00000385290 95 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 RN7SKP206-201ENST00000410823 293 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.05□□□□□ -1.92
CKS1BP61024 CHEK2P3-201ENST00000416118 248 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CKS1BP61024 RPS12P10-201ENST00000427031 377 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC3.05□□□□□ -1.92
CKS1BP61024 AC010733.1-201ENST00000451515 401 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 AC004801.2-202ENST00000463559 283 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.05□□□□□ -1.92
CKS1BP61024 HMGB1P21-201ENST00000502313 581 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.05□□□□□ -1.92
CKS1BP61024 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CKS1BP61024 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.05□□□□□ -1.92
CKS1BP61024 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.05□□□□□ -1.92
CKS1BP61024 AC005921.1-201ENST00000510589 286 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 ATP5LP3-201ENST00000514223 304 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC3.05□□□□□ -1.92
CKS1BP61024 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.05□□□□□ -1.92
CKS1BP61024 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.05□□□□□ -1.92
CKS1BP61024 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.05□□□□□ -1.92
CKS1BP61024 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.05□□□□□ -1.92
CKS1BP61024 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.05□□□□□ -1.92
CKS1BP61024 EDDM3DP-201ENST00000554692 434 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.05□□□□□ -1.92
CKS1BP61024 RN7SL652P-201ENST00000577769 300 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 AC006116.3-201ENST00000592968 361 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 RNA5SP108-201ENST00000605921 117 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 AC005156.1-201ENST00000613371 573 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 AC016957.2-201ENST00000616998 848 ntBASIC3.05□□□□□ -1.92
CKS1BP61024 UOX-205ENST00000640983 544 ntTSL 4 BASIC3.05□□□□□ -1.92
CKS1BP61024 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CKS1BP61024 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CKS1BP61024 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.05□□□□□ -1.92
CKS1BP61024 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
CKS1BP61024 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.05□□□□□ -1.92
CKS1BP61024 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.04□□□□□ -1.92
CKS1BP61024 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.04□□□□□ -1.92
CKS1BP61024 AC118273.1-201ENST00000525324 3006 ntBASIC3.04□□□□□ -1.92
CKS1BP61024 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
CKS1BP61024 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.04□□□□□ -1.92
CKS1BP61024 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CKS1BP61024 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CKS1BP61024 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
CKS1BP61024 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CKS1BP61024 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CKS1BP61024 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CKS1BP61024 RNU1-63P-201ENST00000383902 164 ntBASIC3.04□□□□□ -1.92
CKS1BP61024 HMGB1P10-201ENST00000395823 563 ntBASIC3.04□□□□□ -1.92
CKS1BP61024 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.04□□□□□ -1.92
CKS1BP61024 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.04□□□□□ -1.92
CKS1BP61024 SNORA81-201ENST00000408493 178 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms