Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ATP1B3P54709 AC131971.1-201ENST00000332881 1482 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
ATP1B3P54709 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.87□□□□□ -1.79
ATP1B3P54709 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
ATP1B3P54709 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATP1B3P54709 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATP1B3P54709 AL590240.1-201ENST00000334118 313 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 HMGB1P10-201ENST00000395823 563 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 TAF9BP2-201ENST00000400856 499 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 MIR298-201ENST00000401212 88 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 HMGB1P13-201ENST00000406019 642 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATP1B3P54709 TCEA1P4-201ENST00000415066 844 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.87□□□□□ -1.79
ATP1B3P54709 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATP1B3P54709 FO393419.3-201ENST00000428741 282 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 AL353748.1-201ENST00000440753 474 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 AC012671.1-201ENST00000451912 203 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 DDX39BP2-208ENST00000453923 258 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 CABYRP1-201ENST00000465493 1045 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.87□□□□□ -1.79
ATP1B3P54709 AC008897.1-201ENST00000494006 347 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 MTND4LP2-201ENST00000502312 285 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.87□□□□□ -1.79
ATP1B3P54709 NDUFB5P1-201ENST00000508134 564 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP1B3P54709 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.87□□□□□ -1.79
ATP1B3P54709 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.87□□□□□ -1.79
ATP1B3P54709 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP1B3P54709 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP1B3P54709 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.87□□□□□ -1.79
ATP1B3P54709 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.87□□□□□ -1.79
ATP1B3P54709 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP1B3P54709 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.87□□□□□ -1.79
ATP1B3P54709 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP1B3P54709 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ATP1B3P54709 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP1B3P54709 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP1B3P54709 AC105129.1-201ENST00000560250 297 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP1B3P54709 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.87□□□□□ -1.79
ATP1B3P54709 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP1B3P54709 AC067852.4-201ENST00000590314 478 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 PCNAP1-202ENST00000595299 752 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 IGKV1OR2-9-201ENST00000603957 287 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 IGKV1OR2-11-201ENST00000604120 287 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 AP002360.3-201ENST00000607673 710 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 AC006946.3-201ENST00000609791 756 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 AL023881.1-201ENST00000621088 301 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.87□□□□□ -1.79
ATP1B3P54709 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.87□□□□□ -1.79
ATP1B3P54709 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC3.87□□□□□ -1.79
ATP1B3P54709 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATP1B3P54709 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
ATP1B3P54709 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATP1B3P54709 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
ATP1B3P54709 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ATP1B3P54709 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.87□□□□□ -1.79
ATP1B3P54709 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.87□□□□□ -1.79
ATP1B3P54709 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.87□□□□□ -1.79
ATP1B3P54709 MFSD8-220ENST00000641243 1422 ntBASIC3.87□□□□□ -1.79
ATP1B3P54709 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
ATP1B3P54709 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
ATP1B3P54709 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.86□□□□□ -1.79
ATP1B3P54709 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATP1B3P54709 KARSP3-201ENST00000571212 1504 ntBASIC3.86□□□□□ -1.79
ATP1B3P54709 LINC00622-201ENST00000562811 1570 ntBASIC3.86□□□□□ -1.79
ATP1B3P54709 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
ATP1B3P54709 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATP1B3P54709 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.86□□□□□ -1.79
ATP1B3P54709 SNORD74.4-201ENST00000364129 80 ntBASIC3.86□□□□□ -1.79
ATP1B3P54709 RNA5SP151-201ENST00000365632 117 ntBASIC3.86□□□□□ -1.79
ATP1B3P54709 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATP1B3P54709 RNU6-98P-201ENST00000384173 107 ntBASIC3.86□□□□□ -1.79
ATP1B3P54709 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ATP1B3P54709 AC004022.2-201ENST00000413824 193 ntBASIC3.86□□□□□ -1.79
ATP1B3P54709 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.86□□□□□ -1.79
ATP1B3P54709 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.86□□□□□ -1.79
ATP1B3P54709 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.86□□□□□ -1.79
ATP1B3P54709 HLA-N-201ENST00000437516 135 ntBASIC3.86□□□□□ -1.79
ATP1B3P54709 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.86□□□□□ -1.79
ATP1B3P54709 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATP1B3P54709 AL513343.1-201ENST00000451818 792 ntBASIC3.86□□□□□ -1.79
ATP1B3P54709 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATP1B3P54709 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.86□□□□□ -1.79
ATP1B3P54709 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.86□□□□□ -1.79
ATP1B3P54709 AC025445.1-201ENST00000502728 300 ntBASIC3.86□□□□□ -1.79
ATP1B3P54709 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.86□□□□□ -1.79
ATP1B3P54709 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.86□□□□□ -1.79
ATP1B3P54709 RNA5SP497-201ENST00000516081 97 ntBASIC3.86□□□□□ -1.79
ATP1B3P54709 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ATP1B3P54709 AC004923.2-201ENST00000529649 369 ntBASIC3.86□□□□□ -1.79
ATP1B3P54709 DYNLL1P4-201ENST00000549314 266 ntBASIC3.86□□□□□ -1.79
ATP1B3P54709 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.86□□□□□ -1.79
ATP1B3P54709 MIR3934-201ENST00000579806 107 ntBASIC3.86□□□□□ -1.79
ATP1B3P54709 MIR4737-201ENST00000583979 81 ntBASIC3.86□□□□□ -1.79
ATP1B3P54709 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.86□□□□□ -1.79
ATP1B3P54709 AC090617.9-201ENST00000623751 147 ntBASIC3.86□□□□□ -1.79
ATP1B3P54709 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms