Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SOCS5P3-201ENST00000425115 1576 ntBASIC4.52□□□□□ -1.69
PDX1P52945 NEAT1-202ENST00000501122 22743 ntBASIC4.52□□□□□ -1.69
PDX1P52945 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PDX1P52945 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.52□□□□□ -1.69
PDX1P52945 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.52□□□□□ -1.69
PDX1P52945 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PDX1P52945 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDX1P52945 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.51□□□□□ -1.69
PDX1P52945 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.51□□□□□ -1.69
PDX1P52945 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDX1P52945 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDX1P52945 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDX1P52945 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDX1P52945 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PDX1P52945 HMGB3P18-201ENST00000406327 590 ntBASIC4.51□□□□□ -1.69
PDX1P52945 RNA5SP296-201ENST00000410523 111 ntBASIC4.51□□□□□ -1.69
PDX1P52945 RNA5SP498-201ENST00000411342 120 ntBASIC4.51□□□□□ -1.69
PDX1P52945 RPS7P2-201ENST00000435134 607 ntBASIC4.51□□□□□ -1.69
PDX1P52945 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.51□□□□□ -1.69
PDX1P52945 MED6P1-201ENST00000439659 713 ntBASIC4.51□□□□□ -1.69
PDX1P52945 CBX1P1-201ENST00000440184 427 ntBASIC4.51□□□□□ -1.69
PDX1P52945 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.51□□□□□ -1.69
PDX1P52945 TVP23BP2-201ENST00000455082 615 ntBASIC4.51□□□□□ -1.69
PDX1P52945 RPL7P48-201ENST00000461513 746 ntBASIC4.51□□□□□ -1.69
PDX1P52945 AC010618.1-201ENST00000469924 477 ntBASIC4.51□□□□□ -1.69
PDX1P52945 AC109327.1-201ENST00000471666 403 ntBASIC4.51□□□□□ -1.69
PDX1P52945 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.51□□□□□ -1.69
PDX1P52945 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.51□□□□□ -1.69
PDX1P52945 HAUS1P1-201ENST00000505275 832 ntBASIC4.51□□□□□ -1.69
PDX1P52945 AC093840.1-201ENST00000511599 336 ntBASIC4.51□□□□□ -1.69
PDX1P52945 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.51□□□□□ -1.69
PDX1P52945 RNA5SP464-201ENST00000516251 108 ntBASIC4.51□□□□□ -1.69
PDX1P52945 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDX1P52945 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PDX1P52945 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.51□□□□□ -1.69
PDX1P52945 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.51□□□□□ -1.69
PDX1P52945 AC087477.6-201ENST00000559595 843 ntBASIC4.51□□□□□ -1.69
PDX1P52945 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.51□□□□□ -1.69
PDX1P52945 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.51□□□□□ -1.69
PDX1P52945 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.51□□□□□ -1.69
PDX1P52945 MIR3160-1-201ENST00000577972 85 ntBASIC4.51□□□□□ -1.69
PDX1P52945 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
PDX1P52945 AC022884.3-201ENST00000579571 248 ntBASIC4.51□□□□□ -1.69
PDX1P52945 AC069061.3-201ENST00000582254 823 ntBASIC4.51□□□□□ -1.69
PDX1P52945 MIR548Y-201ENST00000582739 110 ntBASIC4.51□□□□□ -1.69
PDX1P52945 RN7SL435P-201ENST00000584418 282 ntBASIC4.51□□□□□ -1.69
PDX1P52945 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.51□□□□□ -1.69
PDX1P52945 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.51□□□□□ -1.69
PDX1P52945 AC026979.4-201ENST00000606555 645 ntBASIC4.51□□□□□ -1.69
PDX1P52945 AL512427.1-201ENST00000618593 349 ntBASIC4.51□□□□□ -1.69
PDX1P52945 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.51□□□□□ -1.69
PDX1P52945 AC007342.8-201ENST00000623278 678 ntBASIC4.51□□□□□ -1.69
PDX1P52945 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.51□□□□□ -1.69
PDX1P52945 CASC19-206ENST00000641028 1430 ntBASIC4.51□□□□□ -1.69
PDX1P52945 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDX1P52945 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PDX1P52945 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.51□□□□□ -1.69
PDX1P52945 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
PDX1P52945 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDX1P52945 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDX1P52945 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PDX1P52945 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDX1P52945 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PDX1P52945 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.5□□□□□ -1.69
PDX1P52945 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PDX1P52945 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDX1P52945 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PDX1P52945 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.5□□□□□ -1.69
PDX1P52945 AL034370.1-201ENST00000397254 1590 ntBASIC4.5□□□□□ -1.69
PDX1P52945 AC091046.3-201ENST00000631455 1574 ntBASIC4.5□□□□□ -1.69
PDX1P52945 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDX1P52945 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PDX1P52945 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PDX1P52945 RNA5SP515-201ENST00000364570 118 ntBASIC4.5□□□□□ -1.69
PDX1P52945 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.5□□□□□ -1.69
PDX1P52945 RNU4-31P-201ENST00000384211 141 ntBASIC4.5□□□□□ -1.69
PDX1P52945 MIR659-201ENST00000384963 97 ntBASIC4.5□□□□□ -1.69
PDX1P52945 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PDX1P52945 MIR1193-201ENST00000408109 78 ntBASIC4.5□□□□□ -1.69
PDX1P52945 AC013404.1-201ENST00000413068 249 ntBASIC4.5□□□□□ -1.69
PDX1P52945 HMGB3P31-201ENST00000413333 595 ntBASIC4.5□□□□□ -1.69
PDX1P52945 RPL21P108-201ENST00000413857 481 ntBASIC4.5□□□□□ -1.69
PDX1P52945 LINC01881-201ENST00000416103 412 ntBASIC4.5□□□□□ -1.69
PDX1P52945 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.5□□□□□ -1.69
PDX1P52945 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.5□□□□□ -1.69
PDX1P52945 RPL36AP10-201ENST00000421785 322 ntBASIC4.5□□□□□ -1.69
PDX1P52945 AC012519.1-201ENST00000424588 610 ntBASIC4.5□□□□□ -1.69
PDX1P52945 RPL6P5-201ENST00000445678 828 ntBASIC4.5□□□□□ -1.69
PDX1P52945 AL162591.2-201ENST00000449634 317 ntBASIC4.5□□□□□ -1.69
PDX1P52945 RPL7AP28-201ENST00000464513 571 ntBASIC4.5□□□□□ -1.69
PDX1P52945 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.5□□□□□ -1.69
PDX1P52945 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDX1P52945 AC069306.1-201ENST00000507006 843 ntBASIC4.5□□□□□ -1.69
PDX1P52945 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PDX1P52945 AC138701.1-201ENST00000524329 714 ntBASIC4.5□□□□□ -1.69
PDX1P52945 OR5AK3P-201ENST00000527486 1297 ntBASIC4.5□□□□□ -1.69
PDX1P52945 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDX1P52945 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.5□□□□□ -1.69
PDX1P52945 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDX1P52945 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms