Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL133243.3-201ENST00000617415 3004 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.54□□□□□ -1.68
BRCC3P46736 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRCC3P46736 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRCC3P46736 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRCC3P46736 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.54□□□□□ -1.68
BRCC3P46736 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
BRCC3P46736 RNA5SP283-201ENST00000365604 119 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
BRCC3P46736 RN7SKP33-201ENST00000410942 340 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.54□□□□□ -1.68
BRCC3P46736 EIF1P3-201ENST00000423841 334 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.54□□□□□ -1.68
BRCC3P46736 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.54□□□□□ -1.68
BRCC3P46736 AF213884.1-201ENST00000488102 463 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 AC093824.1-201ENST00000508796 343 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 PGBD4P4-201ENST00000509673 613 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 TCP11X3P-202ENST00000514289 1254 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.54□□□□□ -1.68
BRCC3P46736 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.54□□□□□ -1.68
BRCC3P46736 AP003168.1-201ENST00000530091 307 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 AC022882.1-201ENST00000532142 501 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.54□□□□□ -1.68
BRCC3P46736 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.54□□□□□ -1.68
BRCC3P46736 CD24P2-201ENST00000565486 219 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.54□□□□□ -1.68
BRCC3P46736 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.54□□□□□ -1.68
BRCC3P46736 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.54□□□□□ -1.68
BRCC3P46736 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.54□□□□□ -1.68
BRCC3P46736 AC034236.3-201ENST00000605999 461 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.54□□□□□ -1.68
BRCC3P46736 SNORD91B-202ENST00000608459 222 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.54□□□□□ -1.68
BRCC3P46736 AC020923.1-201ENST00000624021 917 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 AC112484.5-201ENST00000624189 228 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 AC092159.4-201ENST00000624944 550 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRCC3P46736 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRCC3P46736 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRCC3P46736 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
BRCC3P46736 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRCC3P46736 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRCC3P46736 AC093775.1-201ENST00000624154 1868 ntBASIC4.54□□□□□ -1.68
BRCC3P46736 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BRCC3P46736 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.53□□□□□ -1.68
BRCC3P46736 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BRCC3P46736 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BRCC3P46736 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
BRCC3P46736 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
BRCC3P46736 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.53□□□□□ -1.68
BRCC3P46736 MTCYBP7-201ENST00000419540 1134 ntBASIC4.53□□□□□ -1.68
BRCC3P46736 AL356276.2-201ENST00000435919 558 ntBASIC4.53□□□□□ -1.68
BRCC3P46736 MTND6P18-201ENST00000439477 513 ntBASIC4.53□□□□□ -1.68
BRCC3P46736 MTCO3P43-201ENST00000440974 771 ntBASIC4.53□□□□□ -1.68
BRCC3P46736 AC006326.1-201ENST00000445465 787 ntBASIC4.53□□□□□ -1.68
BRCC3P46736 HSFY6P-201ENST00000445573 403 ntBASIC4.53□□□□□ -1.68
BRCC3P46736 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.53□□□□□ -1.68
BRCC3P46736 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.53□□□□□ -1.68
BRCC3P46736 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.53□□□□□ -1.68
BRCC3P46736 AC108022.1-201ENST00000493466 478 ntBASIC4.53□□□□□ -1.68
BRCC3P46736 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.53□□□□□ -1.68
BRCC3P46736 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.53□□□□□ -1.68
BRCC3P46736 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.53□□□□□ -1.68
BRCC3P46736 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.53□□□□□ -1.68
BRCC3P46736 AC105233.3-201ENST00000531125 744 ntBASIC4.53□□□□□ -1.68
BRCC3P46736 CYCSP28-201ENST00000534284 321 ntBASIC4.53□□□□□ -1.68
BRCC3P46736 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
BRCC3P46736 AC074029.2-201ENST00000551045 634 ntBASIC4.53□□□□□ -1.68
BRCC3P46736 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.53□□□□□ -1.68
BRCC3P46736 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.53□□□□□ -1.68
BRCC3P46736 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.53□□□□□ -1.68
BRCC3P46736 BMS1P7-201ENST00000602440 1052 ntBASIC4.53□□□□□ -1.68
BRCC3P46736 AP004372.1-201ENST00000604842 844 ntBASIC4.53□□□□□ -1.68
BRCC3P46736 AC005021.1-201ENST00000608730 355 ntBASIC4.53□□□□□ -1.68
BRCC3P46736 AC097505.1-201ENST00000610199 565 ntBASIC4.53□□□□□ -1.68
BRCC3P46736 AL353726.1-201ENST00000614041 1000 ntBASIC4.53□□□□□ -1.68
BRCC3P46736 AL162574.2-201ENST00000614618 657 ntBASIC4.53□□□□□ -1.68
BRCC3P46736 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
BRCC3P46736 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BRCC3P46736 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BRCC3P46736 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.53□□□□□ -1.68
BRCC3P46736 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
BRCC3P46736 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
BRCC3P46736 EOGT-210ENST00000615922 1931 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 LINC01109-201ENST00000603837 3081 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRCC3P46736 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRCC3P46736 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRCC3P46736 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRCC3P46736 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRCC3P46736 RN7SKP224-201ENST00000364140 325 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 MT-TP-201ENST00000387461 68 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 SNORA68.2-201ENST00000391263 128 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.52□□□□□ -1.69
BRCC3P46736 CYCSP10-201ENST00000417973 294 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.52□□□□□ -1.69
BRCC3P46736 BTF3P9-201ENST00000418784 283 ntBASIC4.52□□□□□ -1.69
BRCC3P46736 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms