Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
APOBEC1P41238 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
APOBEC1P41238 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
APOBEC1P41238 AL731566.1-201ENST00000620490 1937 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
APOBEC1P41238 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
APOBEC1P41238 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
APOBEC1P41238 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
APOBEC1P41238 RNA5SP123-201ENST00000363244 119 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
APOBEC1P41238 UBBP2-201ENST00000376781 231 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 SNORA51.12-201ENST00000384448 134 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 RNU6-636P-201ENST00000384598 107 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
APOBEC1P41238 AL645927.1-201ENST00000396783 406 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
APOBEC1P41238 AL589647.1-201ENST00000402485 466 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
APOBEC1P41238 Z75741.2-201ENST00000417272 1167 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 AC027644.1-201ENST00000419595 298 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.41□□□□□ -1.7
APOBEC1P41238 OR2X1P-201ENST00000421144 687 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.41□□□□□ -1.7
APOBEC1P41238 RPF2P1-201ENST00000424137 906 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.41□□□□□ -1.7
APOBEC1P41238 AC112498.1-201ENST00000444401 332 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 MRPL48P1-201ENST00000445390 636 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.41□□□□□ -1.7
APOBEC1P41238 AL591363.1-201ENST00000450091 483 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 RHEBP2-201ENST00000450289 600 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 OTX2P1-201ENST00000450956 354 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
APOBEC1P41238 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.41□□□□□ -1.7
APOBEC1P41238 AC002553.2-201ENST00000453217 340 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 RPL37P3-201ENST00000456825 293 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 snoU13.20-201ENST00000459180 104 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.41□□□□□ -1.7
APOBEC1P41238 RPL23AP56-201ENST00000460778 453 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.41□□□□□ -1.7
APOBEC1P41238 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.41□□□□□ -1.7
APOBEC1P41238 RPL23AP44-201ENST00000482216 473 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
APOBEC1P41238 RN7SL558P-201ENST00000497468 299 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
APOBEC1P41238 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
APOBEC1P41238 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
APOBEC1P41238 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.41□□□□□ -1.7
APOBEC1P41238 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
APOBEC1P41238 RN7SKP283-201ENST00000517197 270 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 RNU6-709P-201ENST00000517257 104 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.41□□□□□ -1.7
APOBEC1P41238 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.41□□□□□ -1.7
APOBEC1P41238 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.41□□□□□ -1.7
APOBEC1P41238 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.41□□□□□ -1.7
APOBEC1P41238 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.41□□□□□ -1.7
APOBEC1P41238 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.41□□□□□ -1.7
APOBEC1P41238 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.41□□□□□ -1.7
APOBEC1P41238 AC044860.2-201ENST00000561005 179 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.41□□□□□ -1.7
APOBEC1P41238 MTND4LP24-201ENST00000572277 291 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 MIR4646-201ENST00000580775 63 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.41□□□□□ -1.7
APOBEC1P41238 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.41□□□□□ -1.7
APOBEC1P41238 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.41□□□□□ -1.7
APOBEC1P41238 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.41□□□□□ -1.7
APOBEC1P41238 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.41□□□□□ -1.7
APOBEC1P41238 AC013244.1-201ENST00000604279 193 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 AL121932.1-201ENST00000605542 214 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 AL445222.1-201ENST00000607259 628 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 AC211433.2-201ENST00000608433 387 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 AC018926.3-201ENST00000618841 406 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 AC116563.2-201ENST00000624751 535 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
APOBEC1P41238 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.41□□□□□ -1.7
APOBEC1P41238 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.41□□□□□ -1.7
APOBEC1P41238 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
APOBEC1P41238 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
APOBEC1P41238 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
APOBEC1P41238 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.41□□□□□ -1.7
APOBEC1P41238 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
APOBEC1P41238 SMG1P6-201ENST00000532337 2930 ntBASIC4.41□□□□□ -1.7
APOBEC1P41238 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
APOBEC1P41238 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
APOBEC1P41238 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
APOBEC1P41238 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
APOBEC1P41238 AL034370.1-201ENST00000397254 1590 ntBASIC4.4□□□□□ -1.7
APOBEC1P41238 AC022031.1-201ENST00000585985 2593 ntBASIC4.4□□□□□ -1.7
APOBEC1P41238 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
APOBEC1P41238 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.4□□□□□ -1.71
APOBEC1P41238 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
APOBEC1P41238 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.4□□□□□ -1.71
APOBEC1P41238 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
APOBEC1P41238 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
APOBEC1P41238 AC093719.1-202ENST00000392735 373 ntBASIC4.4□□□□□ -1.71
APOBEC1P41238 MTCO2P31-201ENST00000402702 684 ntBASIC4.4□□□□□ -1.71
APOBEC1P41238 AL079342.2-201ENST00000403367 482 ntBASIC4.4□□□□□ -1.71
APOBEC1P41238 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.4□□□□□ -1.71
APOBEC1P41238 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.4□□□□□ -1.71
APOBEC1P41238 AC114755.2-201ENST00000413520 361 ntBASIC4.4□□□□□ -1.71
APOBEC1P41238 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms