Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 FAM27B-201ENST00000610601 213 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 AC084824.5-201ENST00000612009 413 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 AC015804.1-201ENST00000622935 435 ntBASIC4.61□□□□□ -1.67
HNF4AP41235 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.61□□□□□ -1.67
HNF4AP41235 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.61□□□□□ -1.67
HNF4AP41235 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.61□□□□□ -1.67
HNF4AP41235 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HNF4AP41235 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HNF4AP41235 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HNF4AP41235 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
HNF4AP41235 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.6□□□□□ -1.67
HNF4AP41235 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HNF4AP41235 SNORA58B-201ENST00000364259 136 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HNF4AP41235 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HNF4AP41235 MIR708-201ENST00000390708 88 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 U3.30-201ENST00000391308 210 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HNF4AP41235 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.6□□□□□ -1.67
HNF4AP41235 AC023128.2-201ENST00000420880 1223 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.6□□□□□ -1.67
HNF4AP41235 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.6□□□□□ -1.67
HNF4AP41235 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.6□□□□□ -1.67
HNF4AP41235 AC008065.1-201ENST00000428525 348 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 BRWD1P3-201ENST00000428816 390 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 AC005189.1-201ENST00000431286 310 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 LYPLA1P1-201ENST00000434514 622 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.6□□□□□ -1.67
HNF4AP41235 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 RPS3AP53-201ENST00000454716 778 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 AURKAPS2-201ENST00000454983 333 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 RPS5P7-201ENST00000456664 608 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 RPS3AP41-201ENST00000462701 778 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 AC104971.1-201ENST00000495117 578 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HNF4AP41235 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.6□□□□□ -1.67
HNF4AP41235 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.6□□□□□ -1.67
HNF4AP41235 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.6□□□□□ -1.67
HNF4AP41235 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.6□□□□□ -1.67
HNF4AP41235 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.6□□□□□ -1.67
HNF4AP41235 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.6□□□□□ -1.67
HNF4AP41235 EDDM3DP-201ENST00000554692 434 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.6□□□□□ -1.67
HNF4AP41235 AC009117.1-201ENST00000563948 554 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HNF4AP41235 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.6□□□□□ -1.67
HNF4AP41235 STMN1P1-201ENST00000617809 440 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 MIR6864-201ENST00000617935 70 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.6□□□□□ -1.67
HNF4AP41235 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.6□□□□□ -1.67
HNF4AP41235 AL136164.3-201ENST00000624429 3978 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HNF4AP41235 NCLP2-201ENST00000416078 1462 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
HNF4AP41235 EIF2AP4-201ENST00000424793 1781 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.6□□□□□ -1.67
HNF4AP41235 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HNF4AP41235 AC092435.4-201ENST00000623012 4159 ntBASIC4.6□□□□□ -1.67
HNF4AP41235 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.6□□□□□ -1.67
HNF4AP41235 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HNF4AP41235 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
HNF4AP41235 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HNF4AP41235 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
HNF4AP41235 RNU1-83P-201ENST00000363426 164 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HNF4AP41235 MIR550A3-201ENST00000390735 95 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 RNU1-82P-201ENST00000390851 165 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HNF4AP41235 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HNF4AP41235 ARL4AP5-201ENST00000404372 599 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 AL078604.1-201ENST00000404609 466 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 HMGB3P18-201ENST00000406327 590 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.59□□□□□ -1.67
HNF4AP41235 AC004987.3-201ENST00000413879 771 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 CYCSP10-201ENST00000417973 294 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.59□□□□□ -1.67
HNF4AP41235 AC004448.2-201ENST00000422360 586 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 AL645608.4-201ENST00000423619 154 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 AC007559.1-201ENST00000428736 355 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 RPS27P18-201ENST00000431701 247 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.59□□□□□ -1.67
HNF4AP41235 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.59□□□□□ -1.67
HNF4AP41235 VN1R54P-201ENST00000435210 1049 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.59□□□□□ -1.67
HNF4AP41235 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.59□□□□□ -1.67
HNF4AP41235 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HNF4AP41235 OR1H1P-201ENST00000448731 937 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 HIGD1AP8-201ENST00000453927 274 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 MTCO1P18-201ENST00000455518 1419 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 AC108751.2-201ENST00000469993 231 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.59□□□□□ -1.67
HNF4AP41235 AC104629.1-201ENST00000494226 508 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.59□□□□□ -1.67
HNF4AP41235 AC005351.1-201ENST00000511152 786 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.59□□□□□ -1.67
HNF4AP41235 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 AC134698.5-201ENST00000519444 336 ntBASIC4.59□□□□□ -1.67
HNF4AP41235 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.59□□□□□ -1.67
HNF4AP41235 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.67
HNF4AP41235 BRD9P1-201ENST00000529855 560 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms