Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 RNU2-30P-201ENST00000516209 141 ntBASIC4.51□□□□□ -1.69
PTPN4P29074 RNU6-1308P-201ENST00000516817 103 ntBASIC4.51□□□□□ -1.69
PTPN4P29074 IGKV2D-10-201ENST00000520194 281 ntBASIC4.51□□□□□ -1.69
PTPN4P29074 HIGD1AP18-201ENST00000520730 278 ntBASIC4.51□□□□□ -1.69
PTPN4P29074 AC090819.1-201ENST00000523800 1111 ntBASIC4.51□□□□□ -1.69
PTPN4P29074 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PTPN4P29074 OR5M2P-201ENST00000529003 936 ntBASIC4.51□□□□□ -1.69
PTPN4P29074 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.51□□□□□ -1.69
PTPN4P29074 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN4P29074 AL110118.1-201ENST00000553543 400 ntBASIC4.51□□□□□ -1.69
PTPN4P29074 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN4P29074 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN4P29074 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.51□□□□□ -1.69
PTPN4P29074 RN7SL802P-201ENST00000577858 299 ntBASIC4.51□□□□□ -1.69
PTPN4P29074 AP005119.2-201ENST00000579735 1105 ntBASIC4.51□□□□□ -1.69
PTPN4P29074 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.51□□□□□ -1.69
PTPN4P29074 AL031666.3-201ENST00000609320 1006 ntBASIC4.51□□□□□ -1.69
PTPN4P29074 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN4P29074 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN4P29074 DDX6P1-205ENST00000441966 1436 ntBASIC4.51□□□□□ -1.69
PTPN4P29074 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PTPN4P29074 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.51□□□□□ -1.69
PTPN4P29074 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
PTPN4P29074 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN4P29074 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN4P29074 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN4P29074 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
PTPN4P29074 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PTPN4P29074 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PTPN4P29074 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN4P29074 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN4P29074 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PTPN4P29074 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN4P29074 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN4P29074 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN4P29074 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.5□□□□□ -1.69
PTPN4P29074 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN4P29074 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN4P29074 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN4P29074 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN4P29074 SNORD113.2-201ENST00000364166 89 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN4P29074 CCNB2P1-201ENST00000399411 1150 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 RSL24D1P8-201ENST00000434442 492 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 MTND2P21-201ENST00000436242 1042 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN4P29074 AL513343.1-201ENST00000451818 792 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 AC092691.2-201ENST00000461787 803 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 RPS23P7-201ENST00000466210 444 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 OR52A4P-201ENST00000472867 958 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 OR52A4P-202ENST00000481634 799 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN4P29074 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN4P29074 OR5M7P-201ENST00000526140 972 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PTPN4P29074 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.5□□□□□ -1.69
PTPN4P29074 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PTPN4P29074 MIR5699-201ENST00000578903 90 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 MIR4512-201ENST00000583257 77 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 MIR4715-201ENST00000584117 79 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN4P29074 AC242628.1-201ENST00000606810 391 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 AP002360.3-201ENST00000607673 710 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 AC083809.1-201ENST00000615051 472 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 MIR6758-201ENST00000620653 63 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 MIR4727-201ENST00000622232 55 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 AC091905.2-201ENST00000623143 306 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 AC007342.8-201ENST00000623278 678 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.5□□□□□ -1.69
PTPN4P29074 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
PTPN4P29074 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PTPN4P29074 AC022893.2-201ENST00000564832 3296 ntBASIC4.5□□□□□ -1.69
PTPN4P29074 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
PTPN4P29074 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.49□□□□□ -1.69
PTPN4P29074 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.49□□□□□ -1.69
PTPN4P29074 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN4P29074 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
PTPN4P29074 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN4P29074 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN4P29074 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN4P29074 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.49□□□□□ -1.69
PTPN4P29074 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.49□□□□□ -1.69
PTPN4P29074 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTPN4P29074 RAD1P1-201ENST00000231383 813 ntBASIC4.49□□□□□ -1.69
PTPN4P29074 OR52B1P-201ENST00000316506 909 ntBASIC4.49□□□□□ -1.69
PTPN4P29074 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPN4P29074 RPL32P3-201ENST00000359025 275 ntBASIC4.49□□□□□ -1.69
PTPN4P29074 AL078604.1-201ENST00000404609 466 ntBASIC4.49□□□□□ -1.69
PTPN4P29074 RPL31P52-201ENST00000407532 367 ntBASIC4.49□□□□□ -1.69
PTPN4P29074 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.49□□□□□ -1.69
PTPN4P29074 AC105402.1-201ENST00000413336 545 ntBASIC4.49□□□□□ -1.69
PTPN4P29074 P2RY10P2-201ENST00000416730 913 ntBASIC4.49□□□□□ -1.69
PTPN4P29074 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.49□□□□□ -1.69
PTPN4P29074 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.49□□□□□ -1.69
PTPN4P29074 GSTA7P-201ENST00000438425 448 ntBASIC4.49□□□□□ -1.69
PTPN4P29074 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.49□□□□□ -1.69
PTPN4P29074 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.49□□□□□ -1.69
PTPN4P29074 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.49□□□□□ -1.69
PTPN4P29074 AL162591.2-201ENST00000449634 317 ntBASIC4.49□□□□□ -1.69
PTPN4P29074 MTND2P3-201ENST00000452458 470 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms