Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFRAP16234 SMARCE1P4-201ENST00000523647 241 ntBASIC4.76□□□□□ -1.65
PDGFRAP16234 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFRAP16234 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
PDGFRAP16234 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.76□□□□□ -1.65
PDGFRAP16234 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.76□□□□□ -1.65
PDGFRAP16234 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.76□□□□□ -1.65
PDGFRAP16234 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFRAP16234 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.76□□□□□ -1.65
PDGFRAP16234 MTND4LP25-201ENST00000570218 163 ntBASIC4.76□□□□□ -1.65
PDGFRAP16234 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.76□□□□□ -1.65
PDGFRAP16234 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFRAP16234 AC015726.3-201ENST00000624501 418 ntBASIC4.76□□□□□ -1.65
PDGFRAP16234 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.76□□□□□ -1.65
PDGFRAP16234 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.76□□□□□ -1.65
PDGFRAP16234 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
PDGFRAP16234 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PDGFRAP16234 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
PDGFRAP16234 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.76□□□□□ -1.65
PDGFRAP16234 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
PDGFRAP16234 AC006042.3-201ENST00000454684 1469 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFRAP16234 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.75□□□□□ -1.65
PDGFRAP16234 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFRAP16234 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.75□□□□□ -1.65
PDGFRAP16234 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFRAP16234 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFRAP16234 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFRAP16234 AC092435.4-201ENST00000623012 4159 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFRAP16234 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFRAP16234 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
PDGFRAP16234 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFRAP16234 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.75□□□□□ -1.65
PDGFRAP16234 PTGES3P2-201ENST00000407942 482 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 VDAC1P9-201ENST00000412766 841 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFRAP16234 RAD23BP1-201ENST00000421404 1227 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 GAPDHP49-201ENST00000421421 961 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 MTND2P11-201ENST00000423638 648 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 PNRC2P1-201ENST00000423940 420 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 CENPIP1-201ENST00000425713 902 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 SEC63P1-201ENST00000425785 1258 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 RPS12P10-201ENST00000427031 377 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.75□□□□□ -1.65
PDGFRAP16234 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFRAP16234 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
PDGFRAP16234 AC111193.1-201ENST00000504097 155 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 AK3P4-201ENST00000504283 583 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.75□□□□□ -1.65
PDGFRAP16234 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.75□□□□□ -1.65
PDGFRAP16234 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.75□□□□□ -1.65
PDGFRAP16234 MTND2P7-201ENST00000521337 640 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 AP001781.1-201ENST00000530977 207 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 CYCSP28-201ENST00000534284 321 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.75□□□□□ -1.65
PDGFRAP16234 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.75□□□□□ -1.65
PDGFRAP16234 AC093765.1-201ENST00000603758 881 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 AC005972.3-201ENST00000606304 481 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.75□□□□□ -1.65
PDGFRAP16234 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.75□□□□□ -1.65
PDGFRAP16234 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.75□□□□□ -1.65
PDGFRAP16234 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.75□□□□□ -1.65
PDGFRAP16234 AC140113.4-201ENST00000622087 222 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 AC091905.2-201ENST00000623143 306 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.75□□□□□ -1.65
PDGFRAP16234 AC083865.1-201ENST00000636634 831 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.75□□□□□ -1.65
PDGFRAP16234 EOGT-210ENST00000615922 1931 ntBASIC4.75□□□□□ -1.65
PDGFRAP16234 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.75□□□□□ -1.65
PDGFRAP16234 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFRAP16234 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFRAP16234 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFRAP16234 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
PDGFRAP16234 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.75□□□□□ -1.65
PDGFRAP16234 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDGFRAP16234 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PDGFRAP16234 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
PDGFRAP16234 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.74□□□□□ -1.65
PDGFRAP16234 Z73965.1-201ENST00000623412 2297 ntBASIC4.74□□□□□ -1.65
PDGFRAP16234 LINC01355-201ENST00000566551 5444 ntBASIC4.74□□□□□ -1.65
PDGFRAP16234 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.74□□□□□ -1.65
PDGFRAP16234 OR10J6P-201ENST00000289731 930 ntBASIC4.74□□□□□ -1.65
PDGFRAP16234 RNA5SP151-201ENST00000365632 117 ntBASIC4.74□□□□□ -1.65
PDGFRAP16234 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.74□□□□□ -1.65
PDGFRAP16234 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PDGFRAP16234 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.74□□□□□ -1.65
PDGFRAP16234 MIR195-201ENST00000385194 87 ntBASIC4.74□□□□□ -1.65
PDGFRAP16234 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.74□□□□□ -1.65
PDGFRAP16234 NPM1P24-201ENST00000428039 894 ntBASIC4.74□□□□□ -1.65
PDGFRAP16234 DNAJC19P7-201ENST00000428811 344 ntBASIC4.74□□□□□ -1.65
PDGFRAP16234 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.74□□□□□ -1.65
PDGFRAP16234 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.74□□□□□ -1.65
PDGFRAP16234 AL031663.1-201ENST00000437445 219 ntBASIC4.74□□□□□ -1.65
PDGFRAP16234 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.74□□□□□ -1.65
PDGFRAP16234 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.74□□□□□ -1.65
PDGFRAP16234 CYCSP42-201ENST00000450823 238 ntBASIC4.74□□□□□ -1.65
PDGFRAP16234 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms