Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC6.77□□□□□ -1.33
TOP2AP11388 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TOP2AP11388 RNVU1-14-201ENST00000384770 164 ntBASIC6.77□□□□□ -1.33
TOP2AP11388 MIR490-201ENST00000384865 128 ntBASIC6.77□□□□□ -1.33
TOP2AP11388 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC6.77□□□□□ -1.33
TOP2AP11388 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.77□□□□□ -1.33
TOP2AP11388 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.77□□□□□ -1.33
TOP2AP11388 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TOP2AP11388 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
TOP2AP11388 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
TOP2AP11388 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TOP2AP11388 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
TOP2AP11388 AC032011.1-201ENST00000611703 1549 ntBASIC6.77□□□□□ -1.33
TOP2AP11388 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
TOP2AP11388 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.77□□□□□ -1.33
TOP2AP11388 USP8P1-201ENST00000494673 3183 ntBASIC6.77□□□□□ -1.33
TOP2AP11388 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TOP2AP11388 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
TOP2AP11388 RPL21P23-201ENST00000446654 460 ntBASIC6.76□□□□□ -1.33
TOP2AP11388 AC104978.1-201ENST00000449387 391 ntBASIC6.76□□□□□ -1.33
TOP2AP11388 TPT1P1-201ENST00000458495 518 ntBASIC6.76□□□□□ -1.33
TOP2AP11388 RAC1P2-201ENST00000511164 579 ntBASIC6.76□□□□□ -1.33
TOP2AP11388 RN7SKP13-201ENST00000515933 244 ntBASIC6.76□□□□□ -1.33
TOP2AP11388 ZNF415P1-201ENST00000582279 1166 ntBASIC6.76□□□□□ -1.33
TOP2AP11388 AC092354.2-201ENST00000607786 514 ntBASIC6.76□□□□□ -1.33
TOP2AP11388 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.76□□□□□ -1.33
TOP2AP11388 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.76□□□□□ -1.33
TOP2AP11388 5S_rRNA.16-201ENST00000612928 119 ntBASIC6.76□□□□□ -1.33
TOP2AP11388 AC119674.1-207ENST00000641355 633 ntBASIC6.76□□□□□ -1.33
TOP2AP11388 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC6.76□□□□□ -1.33
TOP2AP11388 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
TOP2AP11388 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
TOP2AP11388 MIR1251-201ENST00000408552 70 ntBASIC6.76□□□□□ -1.33
TOP2AP11388 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC6.76□□□□□ -1.33
TOP2AP11388 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.76□□□□□ -1.33
TOP2AP11388 AL035423.1-201ENST00000420331 213 ntBASIC6.76□□□□□ -1.33
TOP2AP11388 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC6.76□□□□□ -1.33
TOP2AP11388 HMGB1P37-201ENST00000439613 609 ntBASIC6.76□□□□□ -1.33
TOP2AP11388 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6.76□□□□□ -1.33
TOP2AP11388 RPL21P11-201ENST00000461458 483 ntBASIC6.76□□□□□ -1.33
TOP2AP11388 HSPD1P15-201ENST00000505573 1122 ntBASIC6.76□□□□□ -1.33
TOP2AP11388 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC6.75□□□□□ -1.33
TOP2AP11388 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TOP2AP11388 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TOP2AP11388 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
TOP2AP11388 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
TOP2AP11388 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC6.75□□□□□ -1.33
TOP2AP11388 RPL7AP73-201ENST00000413490 353 ntBASIC6.75□□□□□ -1.33
TOP2AP11388 RPS7P15-201ENST00000415804 584 ntBASIC6.75□□□□□ -1.33
TOP2AP11388 AL121878.1-201ENST00000418638 859 ntBASIC6.75□□□□□ -1.33
TOP2AP11388 RN7SL271P-201ENST00000487601 295 ntBASIC6.75□□□□□ -1.33
TOP2AP11388 OR5M7P-201ENST00000526140 972 ntBASIC6.75□□□□□ -1.33
TOP2AP11388 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC6.75□□□□□ -1.33
TOP2AP11388 AC009852.2-201ENST00000567898 485 ntBASIC6.75□□□□□ -1.33
TOP2AP11388 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC6.75□□□□□ -1.33
TOP2AP11388 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC6.75□□□□□ -1.33
TOP2AP11388 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC6.75□□□□□ -1.33
TOP2AP11388 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
TOP2AP11388 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TOP2AP11388 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
TOP2AP11388 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.74□□□□□ -1.33
TOP2AP11388 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TOP2AP11388 AP001284.1-201ENST00000528393 2118 ntBASIC6.74□□□□□ -1.33
TOP2AP11388 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TOP2AP11388 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
TOP2AP11388 UBE2Q2P12-201ENST00000414573 204 ntBASIC6.74□□□□□ -1.33
TOP2AP11388 DYNLL1P7-201ENST00000429273 258 ntBASIC6.74□□□□□ -1.33
TOP2AP11388 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC6.74□□□□□ -1.33
TOP2AP11388 VN1R92P-201ENST00000598511 928 ntBASIC6.74□□□□□ -1.33
TOP2AP11388 AL031985.2-201ENST00000600955 480 ntBASIC6.74□□□□□ -1.33
TOP2AP11388 AC243654.2-201ENST00000612843 443 ntBASIC6.74□□□□□ -1.33
TOP2AP11388 AC095038.2-201ENST00000621464 1070 ntBASIC6.74□□□□□ -1.33
TOP2AP11388 AC243312.2-201ENST00000623340 601 ntBASIC6.74□□□□□ -1.33
TOP2AP11388 AC055839.1-201ENST00000634467 498 ntBASIC6.74□□□□□ -1.33
TOP2AP11388 AL773545.4-201ENST00000637262 310 ntBASIC6.74□□□□□ -1.33
TOP2AP11388 AL513478.4-201ENST00000641636 310 ntBASIC6.74□□□□□ -1.33
TOP2AP11388 MTCO1P12-201ENST00000414273 1543 ntBASIC6.74□□□□□ -1.33
TOP2AP11388 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.74□□□□□ -1.33
TOP2AP11388 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
TOP2AP11388 MTND5P1-201ENST00000445440 1375 ntBASIC6.74□□□□□ -1.33
TOP2AP11388 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.74□□□□□ -1.33
TOP2AP11388 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.73□□□□□ -1.33
TOP2AP11388 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
TOP2AP11388 SNORA11C-201ENST00000408532 129 ntBASIC6.73□□□□□ -1.33
TOP2AP11388 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC6.73□□□□□ -1.33
TOP2AP11388 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.73□□□□□ -1.33
TOP2AP11388 RPS4XP10-201ENST00000465034 731 ntBASIC6.73□□□□□ -1.33
TOP2AP11388 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.73□□□□□ -1.33
TOP2AP11388 RNA5SP208-201ENST00000516156 78 ntBASIC6.73□□□□□ -1.33
TOP2AP11388 RNA5SP164-201ENST00000516533 110 ntBASIC6.73□□□□□ -1.33
TOP2AP11388 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.73□□□□□ -1.33
TOP2AP11388 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
TOP2AP11388 AC068020.1-201ENST00000594215 661 ntBASIC6.73□□□□□ -1.33
TOP2AP11388 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC6.73□□□□□ -1.33
TOP2AP11388 AC026979.4-201ENST00000606555 645 ntBASIC6.73□□□□□ -1.33
TOP2AP11388 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
TOP2AP11388 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC6.72□□□□□ -1.33
TOP2AP11388 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TOP2AP11388 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
TOP2AP11388 MIR218-2-201ENST00000385006 110 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms