Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RN7SKP267-201ENST00000410381 285 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 RN7SKP278-201ENST00000410504 342 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC010385.1-201ENST00000412374 256 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 RPL6P29-201ENST00000414863 865 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 RPL23AP27-201ENST00000415161 451 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 CHEK2P3-201ENST00000416118 248 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AL161631.1-201ENST00000417933 486 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 BX510359.3-201ENST00000422168 306 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC115285.1-201ENST00000424879 736 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC087650.1-201ENST00000431445 468 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 ZFAND6P1-201ENST00000434138 605 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AL691517.1-201ENST00000440833 1235 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 SUMO2P1-206ENST00000445436 284 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 RAD23BP3-201ENST00000454157 1152 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 RNU6-1218P-201ENST00000458990 108 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 RNU7-27P-201ENST00000459281 62 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC107398.1-201ENST00000486904 505 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC018797.3-201ENST00000513388 1241 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC010342.1-201ENST00000514047 877 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 RNU6-1004P-201ENST00000516584 111 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 EDDM3DP-201ENST00000554692 434 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC018552.3-201ENST00000567416 561 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 OR7E18P-201ENST00000592589 702 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 PSMA6P4-201ENST00000603247 718 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC013244.1-201ENST00000604279 193 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AP001521.2-201ENST00000608772 546 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 FAM27B-201ENST00000610601 213 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC007342.8-201ENST00000623278 678 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC007390.2-201ENST00000606229 3803 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HLA-DQA1P01909 Z73965.1-201ENST00000623412 2297 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 AC093311.1-201ENST00000506586 2021 ntBASIC3.26□□□□□ -1.89
HLA-DQA1P01909 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 HSPD1P11-201ENST00000508643 1702 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 OR11H4-201ENST00000315409 1082 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 RN7SKP95-201ENST00000362860 303 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 RNU6-304P-201ENST00000364855 107 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 MIR92A2-201ENST00000385299 75 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 SPTLC1P2-201ENST00000407089 121 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AP000357.1-201ENST00000409926 1165 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 RPL23AP89-201ENST00000439324 255 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 OR1H1P-201ENST00000448731 937 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 TRY2P-201ENST00000448860 689 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 RPS5P7-201ENST00000456664 608 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 BX284632.1-201ENST00000478218 541 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 RN7SL727P-201ENST00000482164 296 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 RPL23AP72-201ENST00000492447 435 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 RPL37AP8-201ENST00000494116 276 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 HAUS1P3-201ENST00000523909 662 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AC068446.3-201ENST00000555285 382 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AC016180.1-201ENST00000567945 403 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 ELOCP28-201ENST00000590044 317 ntBASIC3.25□□□□□ -1.89
HLA-DQA1P01909 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms