Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SSSCA1O60232 AC007068.1-201ENST00000396690 844 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 SEC63P1-201ENST00000425785 1258 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 FTH1P6-201ENST00000430768 320 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.19□□□□□ -1.9
SSSCA1O60232 RPS20P1-201ENST00000434853 354 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 PPIAP20-201ENST00000449839 135 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 RPL7P61-201ENST00000451721 751 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 MTND2P28-201ENST00000457540 1044 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 RN7SL738P-201ENST00000470264 297 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SSSCA1O60232 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.19□□□□□ -1.9
SSSCA1O60232 AC092045.1-201ENST00000495716 1231 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.19□□□□□ -1.9
SSSCA1O60232 IGBP1P5-201ENST00000507524 1000 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.19□□□□□ -1.9
SSSCA1O60232 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.19□□□□□ -1.9
SSSCA1O60232 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
SSSCA1O60232 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.19□□□□□ -1.9
SSSCA1O60232 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.19□□□□□ -1.9
SSSCA1O60232 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.19□□□□□ -1.9
SSSCA1O60232 RPL12P25-202ENST00000598100 674 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 AC244505.7-201ENST00000599675 272 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 AC020910.2-201ENST00000603635 610 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 AC017076.1-201ENST00000607613 578 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 AL139089.1-201ENST00000620372 975 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.19□□□□□ -1.9
SSSCA1O60232 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.19□□□□□ -1.9
SSSCA1O60232 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SSSCA1O60232 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.19□□□□□ -1.9
SSSCA1O60232 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.19□□□□□ -1.9
SSSCA1O60232 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SSSCA1O60232 CEP170P1-201ENST00000502249 4587 ntBASIC3.19□□□□□ -1.9
SSSCA1O60232 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SSSCA1O60232 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSSCA1O60232 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSSCA1O60232 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSSCA1O60232 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SSSCA1O60232 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SSSCA1O60232 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSSCA1O60232 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.18□□□□□ -1.9
SSSCA1O60232 HMGB3P19-201ENST00000403971 560 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 AL035696.2-201ENST00000407941 709 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 RNU4-25P-201ENST00000410569 230 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.18□□□□□ -1.9
SSSCA1O60232 OR5BE1P-201ENST00000425977 939 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 COX6B1P7-201ENST00000430845 235 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.18□□□□□ -1.9
SSSCA1O60232 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.18□□□□□ -1.9
SSSCA1O60232 SKP1P1-201ENST00000438081 489 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SSSCA1O60232 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.18□□□□□ -1.9
SSSCA1O60232 RANP8-201ENST00000444720 713 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 AC098824.1-201ENST00000453565 980 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 HSPE1P22-201ENST00000456856 327 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.18□□□□□ -1.9
SSSCA1O60232 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC3.18□□□□□ -1.9
SSSCA1O60232 RPL38P1-201ENST00000460914 211 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 RN7SL481P-201ENST00000477764 299 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 AC083982.1-201ENST00000485679 344 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 TRBV12-2-201ENST00000489763 344 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.18□□□□□ -1.9
SSSCA1O60232 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.18□□□□□ -1.9
SSSCA1O60232 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.18□□□□□ -1.9
SSSCA1O60232 OR5M14P-201ENST00000506803 618 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 AC021733.2-201ENST00000518830 497 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.18□□□□□ -1.9
SSSCA1O60232 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.18□□□□□ -1.9
SSSCA1O60232 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.18□□□□□ -1.9
SSSCA1O60232 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.18□□□□□ -1.9
SSSCA1O60232 AL161729.3-201ENST00000603533 673 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 AL034351.1-201ENST00000605288 668 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 AC006946.3-201ENST00000609791 756 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 AL512624.1-201ENST00000613638 469 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 OR5BE1P-202ENST00000641168 1176 ntBASIC3.18□□□□□ -1.9
SSSCA1O60232 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.18□□□□□ -1.9
SSSCA1O60232 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSSCA1O60232 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSSCA1O60232 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SSSCA1O60232 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSSCA1O60232 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.17□□□□□ -1.9
SSSCA1O60232 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
SSSCA1O60232 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
SSSCA1O60232 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SSSCA1O60232 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SSSCA1O60232 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SSSCA1O60232 AC093719.1-202ENST00000392735 373 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 RN7SKP229-201ENST00000410465 302 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC3.17□□□□□ -1.9
SSSCA1O60232 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.17□□□□□ -1.9
SSSCA1O60232 RPL21P109-201ENST00000422213 475 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 AC115285.1-201ENST00000424879 736 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 AC106901.1-201ENST00000425086 698 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.17□□□□□ -1.9
SSSCA1O60232 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.17□□□□□ -1.9
SSSCA1O60232 RPS26P47-201ENST00000427219 348 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.17□□□□□ -1.9
SSSCA1O60232 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.17□□□□□ -1.9
SSSCA1O60232 RPL12P11-201ENST00000439970 501 ntBASIC3.17□□□□□ -1.9
SSSCA1O60232 NANOGP10-201ENST00000453325 895 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms