Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.42□□□□□ -1.38
SOX1O00570 AC111000.3-201ENST00000508057 576 ntBASIC6.42□□□□□ -1.38
SOX1O00570 AC106800.3-201ENST00000511389 308 ntBASIC6.42□□□□□ -1.38
SOX1O00570 DEFB131D-201ENST00000526803 184 ntBASIC6.42□□□□□ -1.38
SOX1O00570 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.42□□□□□ -1.38
SOX1O00570 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC6.42□□□□□ -1.38
SOX1O00570 BNIP3P1-201ENST00000547295 580 ntBASIC6.42□□□□□ -1.38
SOX1O00570 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.42□□□□□ -1.38
SOX1O00570 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.42□□□□□ -1.38
SOX1O00570 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC6.42□□□□□ -1.38
SOX1O00570 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.42□□□□□ -1.38
SOX1O00570 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC6.42□□□□□ -1.38
SOX1O00570 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.42□□□□□ -1.38
SOX1O00570 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.42□□□□□ -1.38
SOX1O00570 BNIP3P10-201ENST00000605360 577 ntBASIC6.42□□□□□ -1.38
SOX1O00570 AC103710.4-201ENST00000609301 899 ntBASIC6.42□□□□□ -1.38
SOX1O00570 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC6.42□□□□□ -1.38
SOX1O00570 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.42□□□□□ -1.38
SOX1O00570 AC116563.2-201ENST00000624751 535 ntBASIC6.42□□□□□ -1.38
SOX1O00570 AC006065.6-201ENST00000625201 545 ntBASIC6.42□□□□□ -1.38
SOX1O00570 MIR7641-1-201ENST00000627518 61 ntBASIC6.42□□□□□ -1.38
SOX1O00570 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SOX1O00570 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.42□□□□□ -1.38
SOX1O00570 AC046144.1-201ENST00000478559 1853 ntBASIC6.42□□□□□ -1.38
SOX1O00570 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
SOX1O00570 PARP4P2-201ENST00000446672 3326 ntBASIC6.42□□□□□ -1.38
SOX1O00570 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SOX1O00570 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SOX1O00570 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SOX1O00570 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.42□□□□□ -1.38
SOX1O00570 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC6.42□□□□□ -1.38
SOX1O00570 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.42□□□□□ -1.38
SOX1O00570 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.42□□□□□ -1.38
SOX1O00570 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SOX1O00570 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
SOX1O00570 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
SOX1O00570 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.41□□□□□ -1.38
SOX1O00570 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SOX1O00570 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SOX1O00570 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SOX1O00570 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.41□□□□□ -1.38
SOX1O00570 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SOX1O00570 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.41□□□□□ -1.38
SOX1O00570 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.41□□□□□ -1.38
SOX1O00570 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
SOX1O00570 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
SOX1O00570 LINC00561-201ENST00000565815 2738 ntBASIC6.41□□□□□ -1.38
SOX1O00570 Y_RNA.1-201ENST00000352915 104 ntBASIC6.41□□□□□ -1.38
SOX1O00570 Y_RNA.25-201ENST00000362528 102 ntBASIC6.41□□□□□ -1.38
SOX1O00570 RNA5SP305-201ENST00000362665 119 ntBASIC6.41□□□□□ -1.38
SOX1O00570 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
SOX1O00570 Y_RNA.409-201ENST00000383990 98 ntBASIC6.41□□□□□ -1.38
SOX1O00570 RNU1-46P-201ENST00000384425 164 ntBASIC6.41□□□□□ -1.38
SOX1O00570 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC6.41□□□□□ -1.38
SOX1O00570 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.41□□□□□ -1.38
SOX1O00570 CYP4F29P-201ENST00000420685 446 ntBASIC6.41□□□□□ -1.38
SOX1O00570 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SOX1O00570 AC073335.1-201ENST00000427776 363 ntBASIC6.41□□□□□ -1.38
SOX1O00570 FCF1P1-201ENST00000432690 571 ntBASIC6.41□□□□□ -1.38
SOX1O00570 AL663074.2-201ENST00000440621 479 ntBASIC6.41□□□□□ -1.38
SOX1O00570 CALM1P1-201ENST00000442082 433 ntBASIC6.41□□□□□ -1.38
SOX1O00570 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SOX1O00570 MTND6P13-201ENST00000443510 523 ntBASIC6.41□□□□□ -1.38
SOX1O00570 AL590365.1-201ENST00000450788 243 ntBASIC6.41□□□□□ -1.38
SOX1O00570 AC016027.4-201ENST00000450866 277 ntBASIC6.41□□□□□ -1.38
SOX1O00570 SNRPGP6-201ENST00000451124 220 ntBASIC6.41□□□□□ -1.38
SOX1O00570 RANP2-201ENST00000456833 229 ntBASIC6.41□□□□□ -1.38
SOX1O00570 RPL38P1-201ENST00000460914 211 ntBASIC6.41□□□□□ -1.38
SOX1O00570 IGLV2-34-201ENST00000490007 283 ntBASIC6.41□□□□□ -1.38
SOX1O00570 AC012170.1-201ENST00000495139 359 ntBASIC6.41□□□□□ -1.38
SOX1O00570 NIPA2P2-201ENST00000496376 1083 ntBASIC6.41□□□□□ -1.38
SOX1O00570 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.41□□□□□ -1.38
SOX1O00570 SLC25A15P5-201ENST00000508033 253 ntBASIC6.41□□□□□ -1.38
SOX1O00570 FGF7P4-201ENST00000509595 295 ntBASIC6.41□□□□□ -1.38
SOX1O00570 KCTD9P2-201ENST00000512203 1013 ntBASIC6.41□□□□□ -1.38
SOX1O00570 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC6.41□□□□□ -1.38
SOX1O00570 AC141257.3-201ENST00000572906 215 ntBASIC6.41□□□□□ -1.38
SOX1O00570 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC6.41□□□□□ -1.38
SOX1O00570 MIR3682-201ENST00000581338 84 ntBASIC6.41□□□□□ -1.38
SOX1O00570 RN7SL52P-201ENST00000584271 284 ntBASIC6.41□□□□□ -1.38
SOX1O00570 AC010928.3-201ENST00000587712 541 ntBASIC6.41□□□□□ -1.38
SOX1O00570 RN7SL722P-201ENST00000617780 284 ntBASIC6.41□□□□□ -1.38
SOX1O00570 RN7SL565P-201ENST00000618246 284 ntBASIC6.41□□□□□ -1.38
SOX1O00570 AC120057.5-201ENST00000623840 154 ntBASIC6.41□□□□□ -1.38
SOX1O00570 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.41□□□□□ -1.38
SOX1O00570 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.41□□□□□ -1.38
SOX1O00570 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.41□□□□□ -1.38
SOX1O00570 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SOX1O00570 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SOX1O00570 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.41□□□□□ -1.38
SOX1O00570 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
SOX1O00570 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SOX1O00570 AC138915.3-201ENST00000562908 1389 ntBASIC6.41□□□□□ -1.38
SOX1O00570 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
SOX1O00570 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
SOX1O00570 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
SOX1O00570 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
SOX1O00570 AC025809.2-201ENST00000625085 1802 ntBASIC6.41□□□□□ -1.38
SOX1O00570 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
SOX1O00570 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms