Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHB1Q9Y5F3 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHB1Q9Y5F3 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHB1Q9Y5F3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHB1Q9Y5F3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
PCDHB1Q9Y5F3 AC093671.1-201ENST00000624981 2929 ntBASIC5.4□□□□□ -1.55
PCDHB1Q9Y5F3 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.55
PCDHB1Q9Y5F3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PCDHB1Q9Y5F3 AC131971.1-201ENST00000332881 1482 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC092079.1-201ENST00000558620 1985 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC005294.1-201ENST00000355509 281 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 U3.2-201ENST00000362981 210 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 RNU6-1066P-201ENST00000363573 105 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 RNU6-931P-201ENST00000363850 107 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 RNU6-553P-201ENST00000364047 96 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 Y_RNA.201-201ENST00000364052 96 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 RNU1-106P-201ENST00000384382 164 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AL589647.1-201ENST00000402485 466 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC073648.4-201ENST00000442655 781 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC073387.1-201ENST00000453261 709 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AL035090.1-201ENST00000454835 332 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 HMGB1P44-201ENST00000508597 572 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 SCARNA16.4-201ENST00000516956 187 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 SCARNA20.4-201ENST00000516969 131 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 MTCO1P49-201ENST00000523429 802 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 DPRXP4-201ENST00000578053 568 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AP005136.1-201ENST00000579765 429 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 OR2AS2P-201ENST00000606902 342 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC131235.4-201ENST00000609288 620 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AL139418.1-201ENST00000613613 177 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC109583.2-201ENST00000617367 129 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC069209.1-201ENST00000619282 651 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AP003072.4-201ENST00000624580 310 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC116618.1-201ENST00000634617 774 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AC099654.6-201ENST00000636487 512 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AL022311.1-201ENST00000623726 19416 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 AP000526.1-201ENST00000603308 1388 ntBASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.39□□□□□ -1.55
PCDHB1Q9Y5F3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 RNA5SP335-201ENST00000363817 110 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 Y_RNA.311-201ENST00000365068 96 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 U3.23-201ENST00000391132 200 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AL161909.1-201ENST00000397390 712 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 RNU2-6P-201ENST00000411404 190 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 RBMY2KP-201ENST00000418221 992 ntBASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDHB1Q9Y5F3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms